KEGG   Bradysia coprophila: 119069187
Entry
119069187         CDS       T08269                                 
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
bcoo  Bradysia coprophila
Pathway
bcoo03030  DNA replication
bcoo03410  Base excision repair
bcoo03420  Nucleotide excision repair
bcoo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bcoo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    119069187
   03410 Base excision repair
    119069187
   03420 Nucleotide excision repair
    119069187
   03430 Mismatch repair
    119069187
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bcoo03032]
    119069187
   03400 DNA repair and recombination proteins [BR:bcoo03400]
    119069187
Enzymes [BR:bcoo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     119069187
    6.5.1.6  DNA ligase (ATP or NAD+)
     119069187
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     119069187
DNA replication proteins [BR:bcoo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    119069187
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     119069187
DNA repair and recombination proteins [BR:bcoo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     119069187
   NER (nucleotide excision repair)
    Other NER factors
     119069187
   MMR (mismatch excision repair)
    Other MMR factors
     119069187
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 119069187
NCBI-ProteinID: XP_037029026
LinkDB
Position
X:complement(2239074..2242959)
AA seq 919 aa
MLLVKLLPNLVPKSARFCIKSLSILHMPRQFNPIQTNNSKVLCRFLESNVKQLTFVKLFS
DDVQPVNGKGKKKRRRVVSSDEEDVVTAKKSSPQKSVKISPKKSAERSPSQTPIKDTKVA
TPVKDVKVVTPVKDAKVEKDDGEFVTSPIKFENEENDSPKTKKQTKASAKSKAKTPKANA
AKKAKIEKKTTPKSASTSPKETVTVRTETNVTEEKAKADSDADDKKENIKKEKESPLAKK
PAAIHSFFTSAKTTKEQSTKGGVSDTDYNPEKQKYHPIDDAFWKHGEKVPYLALARTFEK
IEDISSRLKMIEVLSNFYRSVIVLSPNDLVACVFLCLNQLAPSYEGLELGVAEHSLMKVI
AEATGRSLAQIKTDVANTGDMGIVAQQSKRNQTMLFVPAALMVTDVFEKLREIAKMTGQA
SMGKKGDKIQTIFRRCRHSEARFFVRSLLGKLRIGLAEQSVLQALALACTLTPPNQKEYP
PPILTAFKNEAKLKEKLDEVALEIKTTYCQCPNFGRIIEVLLNDGVDALSEKCQMLPGTP
LKPMLAHPTKGVQEVLQRFDGIKFTCEYKYDGERAQIHIDADGTVSIFSRNQENNTSKYP
DIIGRIDNVKNEAVRSCILDCEAVAWDCEKQQILPFQVLSTRKRKDANESDIKVKVIVFM
FDLLYLNGEPLVTRSFIERRNLLREHFREVDGEWKFATALDTSDIDELQNFLEVSVKENC
EGLMVKTLEKDATYEIAKRSRNWLKLKKDYLSGVGDSLDLVVIGGYKGKGKRTGTYGGFL
LACYDSENEEYQSICKIGTGFTEEDLQKHSEFLKTNIIPNPKSYYKYDSSHQPDDWFEPV
QVWEVLCADLSLSPVHKAAMGIVDPVKGISLRFPRFIRIRDDKAVEDATTACQVADMYSN
QDQIKNQDKSGRDVEEDFY
NT seq 2760 nt   +upstreamnt  +downstreamnt
atgctattggtaaaattattgccaaatttggttccaaaatctgcacggttttgcatcaaa
agtctcagtatcctgcacatgccgagacagtttaatccgatacagacaaataacagcaaa
gttttgtgtcggtttcttgaatctaatgttaaacagctaactttcgttaaattattcagt
gatgatgtgcaaccagtgaatggaaaggggaagaaaaaacgtcggagagtcgttagcagt
gacgaggaagatgttgtgaccgcaaagaaaagctcgccccagaaatcagtcaagatctcg
ccgaagaaatcagctgaaagatcaccatcccaaacaccaattaaggataccaaagttgca
acaccagttaaggatgtgaaggttgtaacacctgtcaaggatgctaaagttgaaaaagac
gatggagaattcgtaacgagtccgattaaatttgaaaacgaagagaatgattcaccgaag
acgaagaaacagaccaaagcttctgcgaaatccaaagctaaaacaccgaaagcaaatgca
gcaaagaaggcaaaaattgagaaaaagacgaccccaaaatccgcctccacttcaccgaag
gaaacagtgactgttcggactgagaccaatgtcacagaagagaaagcaaaggcagatagc
gatgcagacgacaaaaaagagaatataaagaaagagaaagaatcgccgttggccaagaaa
ccagctgcaatacacagtttcttcaccagtgcaaaaacaacaaaagagcaatcaacaaag
ggaggtgtgtctgacaccgactacaatccagagaaacaaaaatatcatccgatcgacgat
gcattttggaaacatggcgaaaaagttccttacctggcgttggctcgtacgtttgagaaa
attgaagacattagcagtcgcttaaaaatgattgaagtgctgtccaacttttaccggtcg
gtgattgttttgagcccaaatgatcttgtggcttgcgtctttttatgcctaaatcaattg
gcaccatcgtatgaaggtcttgaattaggtgtggctgagcattcgttgatgaaagtcatc
gctgaagctacaggaagatcattggctcaaataaaaaccgatgttgccaatactggtgac
atgggcatcgtggctcagcaatcgaaacggaatcagacgatgctgttcgtaccagctgca
ctaatggtgaccgatgtgttcgaaaagttacgagaaattgctaaaatgactggacaggcg
tccatgggtaagaagggtgacaaaatccaaacaatatttcgccgttgtcgccattcggag
gcgagatttttcgtacgctcactgttgggcaaattgagaattggtctggctgaacaatcg
gtactgcaggcactggcactcgcttgcacattgacaccacctaatcagaaagaatatccg
ccaccaatattgaccgctttcaaaaatgaagccaaactgaaagagaagttggatgaggtg
gcacttgaaattaaaacaacttattgccaatgtccgaatttcggaagaatcatagaagta
ttgctgaacgacggtgtcgatgctttatcagaaaaatgccaaatgctaccgggaactcca
ttgaaacctatgttagcgcatccgaccaagggagttcaggaggtgttgcagagatttgat
ggcatcaaatttacttgcgaatacaaatacgacggagaacgggctcaaattcacattgac
gccgatggaacggtgagcatcttttcccgcaatcaagagaacaacactagcaaatatccg
gacatcatcggtcgaatcgataatgtgaaaaatgaagccgttcgatcctgcatcctggac
tgtgaagcagtcgcttgggactgcgaaaagcaacaaattctcccattccaagtgctgtca
acacgaaaacgtaaagacgccaacgagtcagacatcaaagtcaaagtcattgtcttcatg
tttgacctgctgtatttgaacggcgagccgttggttacgcgatcgttcatcgaacgaaga
aacttgctgcgcgaacacttccgtgaagtggatggcgaatggaaatttgcaacagcactg
gataccagcgacattgacgaattgcagaatttcttggaagtgtcggtgaaggaaaattgc
gaaggattgatggtgaaaacattggaaaaggacgcaacatacgaaattgcaaagagatcg
cgcaactggttgaaactgaaaaaggattatttgtcgggtgtcggcgattcgctggatctg
gtcgtcattggcggatacaaaggaaagggaaaacggaccggaacgtacggtggatttttg
ttggcttgttacgacagtgaaaatgaagaatatcaaagcatctgcaaaattggaactggt
ttcactgaagaagaccttcaaaagcattcggaatttttaaagaccaacatcatcccgaac
ccaaaatcatattacaaatacgactcgtcacatcaaccagacgattggttcgaaccagtc
caagtgtgggaggtattatgtgcggatttgtcactgagtccagtacacaaggctgcaatg
ggtattgttgatccagtcaagggaatttccttacgtttcccacgattcattcgcatccgt
gatgacaaagccgtcgaagatgcgacaactgcttgtcaagtggctgacatgtattcgaac
caagatcagatcaagaatcaagacaaatcgggacgtgacgttgaggaagatttttactga

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