Bradysia coprophila: 119070823
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Entry
119070823 CDS
T08269
Name
(RefSeq) DNA mismatch repair protein spellchecker 1 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119070823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcoo03400
]
119070823
DNA repair and recombination proteins [BR:
bcoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119070823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
HAUS4
DUF2884
Motif
Other DBs
NCBI-GeneID:
119070823
NCBI-ProteinID:
XP_037031218
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Position
IV
Genome browser
AA seq
897 aa
AA seq
DB search
MSNVKSAVKPSQALNLDVQQQKNFIKFWESLGEKTSTTVRFFDRTDYYSVHGEDSHLAAK
CIFKSVSNIKTMKPDSNAGLDYLCLSKGNYEILLRELLLVKLFRAELFKRKNNDSRSNDW
HLEAKGSPGNLIQFESVLFNNNEMDIGTTLIALNFKLQDQQKKVGVASVDANERVISIIE
FIDDDFFSELEAIIVLLGPKECVLPTADGEFKTIKKLLDRNNVMVTMTKKTDFNLEKSDL
VQDLNKLLKFEKGQQENAQTLPEMSKTVAMSALGAALKYLNLIGDSCNLGHFEMKLLDLK
RFVHLDAAAVSALNLHPKPGTLINSSAYKWHSILGVLDRCKTAQGHRLMAQWVKQPLRNE
SIIKDRHDIVQCFIDASTARTDLHDSYMKRMPDVMVLCKKLMRKKACLKDLYRLYQVVAR
IPKILAILSDLLNPAVDSVIVSPMKETFGDLKLFKQMVEQVIDAEGIKRGEYFIRPSFDT
ELETVKASMDEVEEKINKKLKAAASDLNLDAGTAIKLEYVAHHGYHFRITLSNESVLRKN
TKYKTLDAVKGGVRFNTDALVALNDEFNEARKAYEEQQQSIVEEVIRVALGYLAPLSCLN
GQLAQLDCLLSFAIAAISAPICYTRPTMSPEGNGVMEFKQLRHPCLELQEDVTFIPNDCS
FKKEETHMSIITGPNMGGKSTYIRSVGAAVLMAQVGSFVPCEYANISIVDCILGRVGADD
NINKGLSTFMVEMIETAQIIRTATENSLVVIDELGRGTSTYEGCGIAWSIAEHLAKVTKC
FTLFATHFHEITELAAYVPTVKNSHMVAVADSENFTLLYQVKPGVMDKSFGIHVAKLANF
PQRVVEEAQKIYDETDDHKSDDEKKSTKYLQAMDILDKIDASSVDDIVAIVQKTLVH
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgtaaagagcgccgtgaagccatcgcaggcattgaatttggacgttcaacag
caaaagaacttcatcaaattttgggagtccctcggtgagaaaacaagcacaacagtccga
tttttcgaccgtaccgactattacagcgtccacggtgaggactctcatttggcagcaaaa
tgcattttcaaatcggtttcgaatataaaaacaatgaaaccggacagcaacgccggattg
gattatttatgcttgagtaaaggcaattacgaaatccttttgcgtgagctgctactcgtg
aaattgttcagggcggaattgttcaaaagaaagaataatgattctcgatcgaatgactgg
catctcgaggccaagggctcaccaggaaacttaatccaattcgagtcggttttgttcaac
aacaacgaaatggatatcggcactacactgattgcactgaactttaaactccaggaccaa
cagaagaaagtcggtgtagcgtcggtcgatgcgaacgaaagagtcatttcgatcatcgaa
ttcattgacgacgactttttcagcgaactggaagctataatcgtactgttgggaccgaaa
gaatgtgtcctgccaaccgctgacggagagttcaagacgatcaaaaagttattggatcgc
aataacgtgatggtcaccatgactaagaagacggatttcaatttggagaagtcggattta
gttcaggacctaaacaagttgttaaaattcgaaaagggacaacaagagaatgcccaaaca
ttaccagagatgtcgaaaacggttgctatgtcagcattgggagcggcgttaaagtatttg
aatctcattggtgattcatgtaatttgggacacttcgaaatgaaattactggacctgaaa
cgatttgttcatttggatgctgcagctgtttccgctctaaatttacatccgaagccggga
accctgataaactcgtccgcatacaaatggcatagtattctgggcgttctggatagatgt
aaaacagctcagggacaccgattaatggcacagtgggttaagcagccattacgaaatgaa
tcgatcatcaaagatcgtcatgatattgtccaatgtttcattgacgccagtacggcgcga
acggatcttcatgatagttatatgaaaaggatgccggatgttatggttttgtgcaagaag
cttatgcgtaagaaggcttgcctgaaagacctgtacagactctatcaagtggttgctcgc
attccgaaaattttagcaatcctatcggatctgctgaatccggcagtcgacagtgtcatt
gtctccccaatgaaggaaacttttggagatctgaagttattcaaacaaatggtggaacag
gttatcgatgcagaaggcataaaacgaggcgaatatttcataagaccatcgttcgacacc
gaattggaaacggtcaaagcatcgatggatgaagtggaggagaagataaacaaaaaactc
aaagctgccgctagtgatctgaatctcgacgctggtacagcaataaaattggagtatgtc
gcacatcacggctatcattttcgcataacgttgagtaatgagagcgttctacgaaagaat
accaagtacaaaacgttggacgcagttaagggtggcgttcgattcaacacagacgcattg
gttgcgttaaatgatgagtttaacgaagcgcgaaaggcgtacgaggaacaacagcaaagc
attgttgaagaagtgattcgcgtcgctcttggctacctggctccgcttagctgtttgaac
ggtcaattggcacaattggactgtctgttaagctttgctattgcggcaatctcagcacca
atttgttacactcggccaacaatgtcccccgaaggtaatggagtaatggagttcaaacaa
ttacgacatccatgcctggaactgcaagaagatgtaacgttcattccaaacgattgttcc
ttcaaaaaagaggaaacacacatgagcatcattaccggtcctaacatgggcggaaaaagt
acttacattcgatcggttggtgcggctgttctgatggcacaagttggatcgtttgttccc
tgcgagtacgctaatatatcgatcgttgactgtattctgggacgagtcggtgctgacgat
aacataaacaagggattgagtacgttcatggtggagatgattgaaactgctcaaattatt
cggactgcgacggagaattctttggtcgtaatagatgaacttggccggggaacatctacg
tacgagggatgcggaatcgcttggtcgattgctgaacatctagcgaaagttacgaaatgc
tttacactcttcgccacccacttccatgaaataaccgaactcgctgcctacgtaccaacc
gtcaaaaacagtcatatggtagccgtagccgatagtgaaaatttcacgttgctgtatcaa
gtgaaacctggcgtaatggataaaagtttcggtattcacgtcgccaagctggccaatttt
ccgcagcgtgtagtagaggaagcgcagaaaatatacgacgaaactgatgatcacaaatcg
gatgatgagaagaaatccaccaaatatttgcaggcgatggacattctcgataaaattgat
gcgtcatctgttgatgacatcgtagccatagtacagaaaactttggttcattaa
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