Bradysia coprophila: 119071156
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Entry
119071156 CDS
T08269
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03022
Basal transcription factors
bcoo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119071156
09124 Replication and repair
03420 Nucleotide excision repair
119071156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcoo03021
]
119071156
03036 Chromosome and associated proteins [BR:
bcoo03036
]
119071156
03400 DNA repair and recombination proteins [BR:
bcoo03400
]
119071156
Enzymes [BR:
bcoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
119071156
Transcription machinery [BR:
bcoo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119071156
Chromosome and associated proteins [BR:
bcoo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119071156
DNA repair and recombination proteins [BR:
bcoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119071156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
nSTAND3
AAA_11
Terminase_6N
Motif
Other DBs
NCBI-GeneID:
119071156
NCBI-ProteinID:
XP_037031802
LinkDB
All DBs
Position
IV:complement(2336643..2339676)
Genome browser
AA seq
771 aa
AA seq
DB search
MKINVDGLLVYFPYEYIYPEQFSYMLELKRTFDAKGHCLLEMPSGTGKTTTLLSLVVAYM
IENPHIVRKLIYCSRTVPEIEKVIAELKHLMSYYEKSGSTKTADMVGLVLSSRKNMCVHS
EVSKEREGKAVDAKCYGLTASYVRERHQADSTTPVCQYYEGFDIEGRESFLPPGIYNLDD
LKQYGRERNWCPYFLTRFAINNASIIVYSYHYLLDPKIAEVVSKQLQKEVVVVFDEAHNI
DNVCIDSMSVKINRRTMEKCTTALGKLDTLVQEMKDYDTNRLNEEYQNMVQGLRQASANR
DADLVLANPILPDDILQGAIPGNIRTADHFLSFLRRFVEYIKFRLRVQHVVQESPAGFLK
DVQQKVCIERKPLRFCAERLASLLRTLEITDMTEYGGLVVITHFATLISTYTKGFTVIVE
PFDDKTPTVANPVLHFSCLDSSIAMKPIFNRFQSVVITSGTLSPMEMYPKILDFDPVIMT
SLTMTLARPCLLPMIVSKGNDQVAISSKFETRDDTAVIRNYGQLLVETAKCVPDGIVCFF
TSYLYLESVVASWYDQGIVDTLLRYKLLFIETQDNAETSYALMNYIKACDCGRGAVLLAV
ARGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAIRH
ASQCVGRAIRGKTDYGIMIFADKRFSRQDKRTKLPKWIQEHLTDNYCNLSTEEAMQIARR
WLRHMAQPFTREDQLGVSLLTIQQLQAMEREKLAKEAKEKEVNDENDDEMM
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaacgtcgatggacttcttgtttatttcccgtacgagtacatttatccggag
cagttttcatatatgttagagctgaaacgaacattcgatgcaaagggtcactgtctgctt
gaaatgccctcgggtactggcaaaacaacaacacttctatcgcttgttgttgcctacatg
atcgaaaatccgcacatcgtccgaaagctgatttattgctctcgaacagtaccggaaatc
gaaaaagttatcgccgaactgaaacatctgatgagctactatgaaaagagcggcagtacc
aaaacagcggatatggtaggcctggtgcttagttcgcgaaagaatatgtgcgttcactcg
gaagtgagtaaggaacgagaaggcaaggccgttgacgctaaatgctatggtttgaccgcc
agctatgtccgagaacgacatcaggccgatagtacgacgccggtttgccagtactatgaa
ggttttgatattgaagggagagaatcgtttcttccaccgggcatctataatttggatgat
ttgaagcaatacggtcgagagaggaactggtgtccttattttctgacacgatttgccatt
aataatgcgagcatcatcgtctacagttaccattatttgctcgatccgaagatagcggag
gtggtttccaagcagttacagaaggaagttgtcgtagtgttcgatgaggcgcacaatatt
gataatgtttgcattgactcaatgagtgtgaaaataaaccgacgaacaatggaaaagtgt
accactgcgctgggaaaattagatactttggtgcaagaaatgaaggactacgacaccaat
cgcttaaacgaggaatatcaaaatatggtgcaaggtctgcggcaagcaagtgctaacaga
gatgcggatctggtgttggctaatcctattttaccggatgatattttgcagggtgcgatt
cccggcaacattcgcacagctgatcattttctaagctttctccgtcgcttcgtggaatat
ataaaatttcggttaagagtgcagcatgtggtgcaagaatctccagctggtttcctgaaa
gatgtccaacaaaaagtgtgcatcgagcgtaagccattacgattttgtgccgaacgcttg
gcttcactattgcgaacgttggaaatcaccgacatgaccgaatatggtggcttggtcgtg
atcacccattttgctacgctgatatcgacatacaccaaaggattcacagtaatcgtcgaa
ccgttcgacgataaaacaccaacagtcgcaaatcctgtactccatttcagctgtctggac
tcgtcgatagccatgaagcctatattcaatcgttttcaaagtgtggttattacgtcggga
accctgtcgcccatggagatgtatccaaaaatcttagattttgatccagttataatgaca
tcactaaccatgaccctggcgagaccatgcttactgccaatgattgtgtctaaaggtaac
gatcaagtggccatctcctctaaattcgaaacaagagatgacacagcggtcatacgaaat
tacgggcagctactcgtcgaaacggctaaatgtgtacccgatggaatcgtatgctttttc
acatcgtatttgtacttggagtctgtggtggcgtcgtggtatgatcaaggcattgtcgat
acgttactgcgatacaagttgctgtttattgaaacgcaagataacgctgaaacgtcctac
gccttgatgaactatattaaggcatgcgattgtggccgtggtgccgtactgttggctgtg
gctcgtgggaaagtctccgaaggtgtcgatttcgatcatcatttgggtagagcggtactc
atgttcggtattccatacgtttacacgcagtcacgcattctgaaggctcgtctagaatat
cttcgcgatcaatttcaaattcgcgagaacgacttcctcacttttgatgcaattcgtcac
gcgtctcaatgtgtgggacgtgccattcgcggaaagaccgactacggtattatgatattc
gctgataagcggttctcacgtcaggataaaagaaccaagcttccgaagtggatccaagag
catcttaccgacaattactgtaatttaagcacagaagaggctatgcaaatcgcaaggcga
tggttgcgacacatggctcaaccctttaccagggaagatcagttgggagtgagtttgctg
accattcaacagctgcaggctatggaaagggaaaaattagcgaaagaagcgaaggagaag
gaagtgaatgacgaaaatgatgatgagatgatgtaa
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