KEGG   Bradysia coprophila: 119071672
Entry
119071672         CDS       T08269                                 
Name
(RefSeq) endoribonuclease Dicer-like
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
bcoo  Bradysia coprophila
Brite
KEGG Orthology (KO) [BR:bcoo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bcoo03036]
    119071672
Chromosome and associated proteins [BR:bcoo03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    119071672
   microRNA pathway
    RISC loading complex
     119071672
SSDB
Motif
Pfam: Ribonuclease_3 Ribonucleas_3_3 DEAD ResIII Dicer_dsRBD Dicer_dimer Helicase_C Dicer_platform PAZ SLFN-g3_helicase Dicer_PBD Cas3-like_C_2
Other DBs
NCBI-GeneID: 119071672
NCBI-ProteinID: XP_037032546
LinkDB
Position
IV:8441687..8446969
AA seq 1630 aa
MSSLIEKQEQQEAKEMEIDLPLELPKARPYQEELLATAKEKNSLICLGTGAGKTYIAVML
ISHFSHELEPPYDEDGKRTFFLVPTRPLVKQQAAEIVKKSRLGEKDVGEYTGDMNVDFWS
KDVWLEHLRTKKVFVMTRQIFLNMLNSAIIPLSKVNLLIFDEAHHAAPKAKKKGKGSGKD
TNDVYKLIMDFIHSRPESDHPRILGLSASLINANSNAVALQRTIRDLEGTYKSSCTSVTD
LDDVRKYATDPVESIWEYASDSAVIGFDCAHVQTFLSSARDVFFEMDAYKASLDRKNDSN
RTEQNTDEIPTNSMAITLPISVDALKKCESMISDILQSMGPWCAIAACDFYIQEFQSYIE
LYQHSYPGFCSILTTVNDMIETVVGLLKYSLYIRQVSLNDMLLKYISNKMERLLLLLMEY
SDPNKPLAGIIFVQRRAMCKALCKWLQKIKELNLKKAKNPFDFLKTDYIVGEAARPGFAN
KIAVKAAQLQKKTLNKFRSGDLNILVSTSILEEGLDVSQCNLVVRYDGVDSFRQWVQSQG
RARSKDGRFVVFSNSTSVTQQSLDNFKGMFKELQTLATSRKHTNPSSVSRTPRNIPEDEM
PLINPVNGARITLDTAKAMVFMYCSRLPSDAFFSTNPYETRIEHPNGFQFVIRLPINSPI
KRAMKGPVKLNESLACKTAYLEVCRILREEDEIDESFVPYTKSSRLKRIIDEFNLTCSID
DDETYIDGPKPGTAKRRQIYSKSFETMFATLPIKSSTTICLYSIDVQPKTGRNSIGFICS
EDVPLNRIVSSFPVYIKTAEYKISVASCDTAFHLSPEQLHQVQLFHQVVFHESLGFKRKQ
LKFDDSSPVYVVPLNDEFGVDWNMVQVTLDRNNTNATIITKNDAYQQHFTFNESVYNDAM
VFRRYEPFGLFEVLKVSTKTPSSRFPNNDNGYTTYEDYFGKQYGLTIIHSHPLLCVDPIG
FNSSIKQVALTKAEQKRKPIELVPELLLIFPIPTSFHRQCRLLPAIFYRLCQFYNIETLR
ERIATEANFGWATANHNWGPLNVESVQSICRQEKVVRGSAKNSDSDANGDDSERSMDSND
MEVDSSFQMDEDMGSTISQSEDIYGDVDELKRKYSNFNVKAYAYSMKQKLMNDYKKFLEA
PVVGYDLGDHSQYLPQNSEIQRNRFVDFERVKSFDRHTRVDMFGPSPSLILQALTTNKAI
DMFNMERLETLGDSFLKLTTSAYFYYKLPVLNEGYLSLLKVNQISNRNLYRLGSKKDLAE
FVVAHQFQPCNNWLPPGFSADIDTSEKKEKQDGESCNKYTEQRISDKSIADCCESLIGAY
LLSSGPMGAVSFMTWLGIRIVDPQSTENNGHWLPPPRSPKSTSTSGDSEIKIKNLSSTLT
EFEERIGYNFHDKCFLIQAMTHVSYHDNTITDCYQRLEFLGDAVLDYLITRYIYEDPNRF
KPGDLTQLRASLTNNAFFGSLAVKNRFHVHLKMSSYDLYRSIHSFADKIKTDAKDDIVFG
NFMTLLDERETQDSDEAEVPKALGDVFEAVAGGIYLDSNYSLDAVWQVYYPLMASELENF
SKNIPKSPLSLLYMKYQSVKFSDAVAVNKREVSVTVTIKHKGGTFTEDGYGKNRYWAKSS
AAKRALRRKM
NT seq 4893 nt   +upstreamnt  +downstreamnt
atgtcatcattgatagagaagcaagaacagcaagaagcaaaagaaatggaaattgattta
cccttggaactgcctaaggcccgtccttaccaggaggagctgctagcaactgccaaggaa
aaaaactcgttgatttgtctaggaacgggagcgggtaaaacgtacatagccgttatgctg
atttctcatttttcgcacgaactggagccgccctacgacgaagatggtaagagaacgttc
ttcttagtgcctaccaggcctttagtgaaacaacaggcagcagagattgtgaagaaaagt
cgattaggtgagaaagatgttggcgaatatactggtgatatgaatgtcgacttctggtcg
aaggacgtttggctggaacatttgcgtaccaagaaggtgttcgttatgacacggcagatt
ttcctcaatatgttaaattcggcaattattccgttgagtaaggtgaatctattgatattc
gacgaagcccatcatgcagcaccgaaggcaaagaaaaaaggaaagggcagtggaaaggac
acgaacgatgtctacaagctgataatggattttattcattcgaggcctgaatcggatcat
ccacgtattttgggactgtcagcaagtcttattaacgctaacagcaatgcggtggcatta
caacggacaattagggatttggaaggcacttataagtcgtcttgcacatccgttaccgat
ttggatgatgtacgtaaatacgcaacggatcccgtagaaagtatttgggaatatgccagc
gacagtgctgtgattggatttgattgtgctcacgttcagacatttttatcatcagctcgg
gatgttttctttgaaatggatgcatacaaagctagtctggaccgcaaaaatgacagcaac
agaaccgaacaaaatacagatgaaataccgaccaactccatggccattactctacccata
agtgtggatgctttaaagaaatgcgaaagtatgatcagtgacattcttcaatcgatgggt
ccttggtgtgcgatagctgcatgcgatttttatattcaagaatttcagagctacatcgaa
ctttaccaacactcatatccaggattttgtagcattttaacaacggttaacgacatgata
gagacagtcgtgggtcttctaaaatacagcctttacatacggcaagtgtcactcaacgat
atgctcctgaagtatatttccaacaaaatggaacgtcttcttttattgttgatggagtac
agcgatccgaataaacctttagctggaattatattcgtacagcgtcgcgctatgtgtaag
gcgttatgcaaatggttgcaaaagatcaaagaactcaatttaaagaaggcaaagaatcca
tttgactttctcaaaactgactacattgttggcgaagcagcccgacccggatttgccaat
aaaattgctgtcaaggctgctcaactccagaagaagactttgaacaagttccgcagtggt
gatctgaacatactcgtatcgacatcaattttggaagaaggactcgatgtgtcccagtgt
aatcttgttgttcgatatgacggcgttgactcattcagacagtgggttcaatcacaagga
cgagcaagatcaaaggatggtcgatttgtggttttcagtaactcaacatcggtgacccaa
caaagtcttgataacttcaaaggtatgttcaaagaattacaaacacttgcaacaagtaga
aagcatacgaatccttcgtccgtatcccgtaccccgcgtaatataccagaagacgaaatg
ccactgatcaacccagttaatggagcaagaattaccctagacaccgccaaggcaatggtc
tttatgtactgcagtcgactgccgtctgatgcattcttttccacaaatccatacgaaact
aggattgaacatccgaatggatttcaatttgtcattaggttgccaataaactctccaatt
aagcgggcaatgaaaggacctgttaagctaaacgaatccttggcgtgtaaaactgcttat
ttagaagtgtgtcgcattctacgcgaagaggacgaaatcgatgagtcgttcgttccatac
accaagtcatcaaggctcaagaggataattgacgaattcaatcttacatgttcgatcgac
gacgatgaaacgtacattgatggaccgaaacctggaacggccaaacgacggcaaatttat
tcaaagtctttcgagacgatgttcgctaccttgccaatcaagtcgtcgacaacgatctgt
ctttattcgattgacgtacagcccaaaactggcagaaattctattggtttcatttgttca
gaagatgtaccacttaaccggattgtttccagctttccagtttacatcaaaactgctgag
tataaaatttcagttgcgtcttgcgacacagcctttcatctcagcccggaacagcttcac
caagtgcaattattccatcaggtagtgtttcatgaaagtctcggattcaagaggaaacaa
ttgaagttcgacgactcgtctcctgtttatgttgttccgttgaacgatgaattcggtgtt
gattggaatatggttcaggtcacattggatcgcaataatacgaacgcaacgatcatcacc
aagaatgatgcataccaacaacatttcacattcaacgaaagtgtttacaacgatgctatg
gtgtttcgacgctatgaaccgttcggtcttttcgaagtccttaaagttagcactaagact
ccaagttcacgatttcccaataatgacaacggatacacgacatacgaggattatttcggt
aaacaatatggcttgacgatcattcattcgcacccgttactgtgtgtggatccaatcggc
tttaacagttccattaaacaagtggcactaaccaaagccgaacagaaacgtaaacctatt
gagctagttccagaattgttgttgatctttccaataccgacgtcgtttcatcgtcagtgc
cgtcttctacctgcaattttttatcgattgtgtcagttctacaacatagaaacattgaga
gaacgaatagcgacggaggctaattttggatgggcaacagctaatcacaattggggtcca
ttgaacgttgagtctgtgcagagtatttgccgacaggagaaagtagtgcgaggctctgca
aagaacagcgatagtgatgcaaacggcgacgacagtgagcggtcgatggattctaacgat
atggaagtggattcttcatttcaaatggatgaagatatgggttcaacgattagtcagtct
gaagacatttacggcgatgtcgatgaattgaaaagaaaatattcgaacttcaatgttaaa
gcctatgcgtactcgatgaagcagaaactgatgaacgactacaagaagtttttggaggcg
ccagtagttggctacgatttaggtgatcacagccagtatttgccacaaaattctgaaatt
caaagaaatcgcttcgttgactttgaaagagtcaaatcatttgatcgtcacactagggtt
gacatgtttggacctagtcccagtttaattctgcaggcattaacgacaaacaaagcaatt
gacatgttcaatatggagagattagagacacttggcgacagtttccttaaattaacaacg
tctgcgtatttttactacaagctaccagtactcaatgagggatacttgtctttattgaaa
gtgaatcaaatctcgaatcgtaatctgtatcgtttgggatcaaaaaaagatttggccgaa
tttgtggtagctcatcaatttcaaccgtgcaacaattggcttcctccaggattttccgcg
gacatagatacgtcggagaaaaaggagaaacaagatggagaatcatgcaacaagtacact
gagcaacgaatttccgataaatcaatagctgattgttgcgaatcattaattggagcatat
ctgttgtcgagtggaccaatgggcgcagtaagtttcatgacatggttgggtattcgaatt
gtggatccacagtcgactgaaaacaatggccattggcttccaccgccccgatcaccaaaa
tctacttcaacatcgggtgattcagaaatcaaaatcaaaaacctttcgtcaacgttgacc
gaattcgaagagcgtattggatacaatttccatgacaaatgtttcctcattcaggctatg
acacatgtgtcgtatcacgacaataccataactgattgctaccagcgattggagttcctc
ggagatgctgtcttggactatctcataacacggtacatatacgaagatcccaaccgcttt
aagcctggcgatttgactcagctaagagcatctctgacgaacaatgcattttttggctcg
ctggcggtcaagaatcgatttcacgttcacctaaaaatgagttcgtacgatctctaccgt
tccattcattcgtttgctgataaaattaaaaccgatgcaaaggatgacattgtctttggc
aatttcatgacgcttctcgacgaacgagagacccaggattcagatgaagccgaggtgccg
aaggcgttgggtgatgtgttcgaagctgttgctggtggtatctatttggactctaattat
tcgctggatgctgtatggcaggtctactacccactcatggcgagtgagcttgagaacttc
agcaaaaatattccgaaaagtccgttgagtttgctgtacatgaaatatcaatctgtgaaa
ttcagcgacgctgtagcagtgaacaagcgtgaggtcagtgtgactgttacgatcaagcat
aaaggaggaacgtttaccgaggatggctacggcaaaaatcgttattgggctaaaagttcg
gcagcaaaacgtgccttaaggcgaaaaatgtaa

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