Bradysia coprophila: 119071941
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Entry
119071941 CDS
T08269
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
bcoo
Bradysia coprophila
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcoo03016
]
119071941
Enzymes [BR:
bcoo01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
119071941
Transfer RNA biogenesis [BR:
bcoo03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
119071941
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
119071941
NCBI-ProteinID:
XP_037032960
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Position
IV
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AA seq
290 aa
AA seq
DB search
MSESSTITVTFINNAGFIFNGQDYMTLRKTYRIIGNLVGSSLISSRNFSHKGLPVLLSHL
ELQLLLEKNIISLLSKKGLSAQPTEEQQLQFKNFQSSHLAGQHEVLRDNKLNESRKYIGD
IMRGKEKKLLKAGVKKEDIHLNEEDVLKDIRDSYDFSDDNALIQIPTEHPFDVESERITL
TADSTFKYRVFKDLWERGGTITSGESFGGDFLVYPGDPLYFHASHIVHVVESSNISPVTM
MSCGRLAVNVNKQCLFAVLDVDRDEICYLNMSWEGNKSARLMENKGIENS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaatcgtcaacaataactgttacatttatcaacaatgctggtttcattttcaat
ggacaagactacatgacacttcgcaagacttaccgaataataggaaatttggttggctcg
tcgttgataagctctcgcaactttagtcacaaaggtcttcctgtactattaagtcatctc
gaactgcagctcctgctcgaaaaaaatatcatctcccttctgtcgaagaaaggcctatca
gctcaaccaacggaagagcaacaattgcaatttaaaaatttccaatccagtcatttggct
ggtcagcatgaagtgctacgcgacaataaactcaatgagagccgaaagtacattggcgat
attatgcgaggaaaagagaagaaattgctgaaagcgggcgtgaagaaagaggacattcat
ctgaacgaagaagatgttctgaaggacatacgcgattcgtatgatttcagtgatgacaac
gcgttaattcaaataccaacggagcatccatttgatgtcgaatccgaacgtatcaccctt
accgccgacagtacatttaaataccgagtcttcaaagacctgtgggaacgcggtggaact
atcacatcaggtgaatcattcggtggcgactttctggtctatcccggcgatccattgtac
tttcatgcgtcgcacatagtccatgtcgtggagagtagtaacatttccccggtcacgatg
atgtcatgcggtcgactcgctgtcaatgtgaacaaacagtgtctgttcgctgtgttggac
gttgatcgagacgaaatttgttacttgaatatgtcgtgggaagggaataagtcggcgaga
ctgatggaaaataaaggcatcgagaacagttga
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