Bradysia coprophila: 119072189
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Entry
119072189 CDS
T08269
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
bcoo
Bradysia coprophila
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bcoo03041
]
119072189
03016 Transfer RNA biogenesis [BR:
bcoo03016
]
119072189
Enzymes [BR:
bcoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119072189
Spliceosome [BR:
bcoo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119072189
Transfer RNA biogenesis [BR:
bcoo03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
119072189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
119072189
NCBI-ProteinID:
XP_037033243
LinkDB
All DBs
Position
IV:complement(825609..828672)
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AA seq
725 aa
AA seq
DB search
MTAFEEFGVLPEIAKAVDEMEWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWETLKDLADGKGAKGAVSAAIPSWTMSFFDRGNALAVTPDGLRCQSREFKEWHGCR
STTGVKGTGKYYFEAIVTDEGLCRVGWSTDQANLDLGTDKFSFGFGGTGRKSHNKQFDPY
GEEFGMHDVIGCCLDLQNYEVRFTKNDKDLGVAFSIPNNLRNSTFYPAVVLKNAEMQFNF
GATEFKHKIPNGYVAVSKVDPKNVVQNPRASNSGSGQDFVPKPNAPQAIIIEPSRELAEQ
TLNQIVKFKKFLKDPLVRELLIIGGVNVRDQLSVLQQGVDILVATPGRLDDLIGGGQVSL
THCRFFVLDEADGLLSAGYLNMIENLHKQIPKITVDGRRLQMIVCSATLHSFDVKKMAEK
LMHFPTWVDLKGEDAVPETVHHVVTMVDPQKDLSWHNMKRHIQTDGVHNNDNVRPGNNTA
ETFSEAVKMLKAEYLIQAIEEHKMDRALLFCRTKVDCDNLENYLKQVGGQKYSCVCLHGD
RNPKERKANLESFKASKVKFLICTDVAARGLDISGLPFVVNFTLPDEKSNYVHRIGRVGR
AERMGLAISLVATVPEKVWYHGQWCNSRGKNCWNTNLTDVKGCCMWYNEKNYLADIEDHL
NITIQQVDKNMKVPLNEFDGKVVYGEKLQNSGTGYKDHVAQMTSVLSRLSDLESKAQTMF
LKRFL
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgacggcttttgaagaatttggtgtcctgcctgaaattgcaaaggctgtcgatgaaatg
gaatggacacttcctaccgacgtgcaagcagaagctattccattaattctaggcggtggt
gatgtgttgatggctgctgaaaccggcagtggaaagactggagcattctgtttaccgatt
cttcaaattgtgtgggaaacactcaaagatttggcagatggtaagggagcaaaaggtgcc
gtgtcggcggcaataccttcgtggacaatgtcatttttcgaccgtggcaatgcattagct
gtcacgcctgatggtctgagatgccagtcccgggaatttaaagagtggcatggatgtcgc
agtactactggtgtaaaaggcacaggaaagtactactttgaggctatcgttactgacgag
ggtctctgccgtgtcggttggtccactgaccaggccaatcttgacttaggtacagataag
ttcagtttcggtttcggcggaactggtagaaagtcgcacaacaagcaattcgatccgtac
ggtgaggagttcggaatgcatgatgttatcggatgctgccttgatctccagaattatgaa
gttcgattcacgaaaaatgacaaagatctgggcgttgcattttccataccgaataatcta
cgaaactcaacgttctatccggcggttgtgctaaaaaacgccgagatgcaattcaacttt
ggtgccaccgaattcaaacataaaattccgaatgggtatgtggctgtgtcgaaagtcgac
ccgaagaatgtcgttcaaaatcctcgtgcttcgaattcgggaagtggacaagactttgta
ccgaagccgaatgcaccgcaagccattatcattgaaccatctcgtgaattggccgagcag
acgctcaatcaaatcgttaaatttaagaaatttttgaaagatcctctggtccgagaacta
cttataattggaggtgttaatgttcgtgatcagttgtcagttttgcagcaaggtgtcgac
attctggtggctacgccaggtcgattggacgatttgataggtggtggacaggtttcactg
actcactgtcgattctttgtattggatgaagccgatggtcttctaagtgctggttacttg
aacatgatcgaaaatttgcataagcaaattcccaaaataaccgttgatggacgtcgactg
caaatgatcgtttgcagtgccacattacattcgttcgatgtgaaaaagatggcagagaaa
ttgatgcattttcccacttgggttgatttgaaaggcgaggatgctgttccagaaacggtt
catcacgttgtcaccatggtcgatccacaaaaggacttatcgtggcacaacatgaagcga
cacatccaaactgatggagtgcacaacaatgataatgttcggcctggcaacaatacggca
gaaacattttccgaggcagttaaaatgctcaaggcggaatacttgatccaagccatagaa
gagcataaaatggatcgggcgcttctgttttgccgtacgaaagtggattgtgacaatttg
gagaattatttgaaacaggttggcggtcagaaatattcttgtgtgtgtttgcatggtgac
cggaatcccaaagaacggaaagcaaatttggaatcgttcaaggcgtctaaggtcaaattt
ttgatttgcaccgatgttgcagccagaggtctggatatttcgggtctaccgttcgtcgtc
aactttacccttcccgatgaaaaatccaattacgtccatcgaatcggtcgtgttggacgt
gctgaacgaatgggtcttgctattagtcttgtcgctacggttcccgaaaaggtatggtat
catggacaatggtgcaattcccgtggcaaaaactgctggaatacaaacctaacagatgtg
aaaggatgttgcatgtggtacaacgaaaagaattatttggctgatatagaagatcatctg
aatataaccattcagcaagtggacaaaaacatgaaggtgccactgaacgagtttgatggc
aaagtggtctacggtgaaaaacttcaaaattccggcactggctacaaggaccacgtagcg
cagatgaccagcgttttgtcacgtctctctgatttggagtcgaaggctcagacgatgttc
ttgaagagatttctgtag
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