Bradysia coprophila: 119072245
Help
Entry
119072245 CDS
T08269
Name
(RefSeq) probable ATP-dependent RNA helicase kurz
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
bcoo
Bradysia coprophila
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcoo03009
]
119072245
Enzymes [BR:
bcoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119072245
Ribosome biogenesis [BR:
bcoo03009
]
Eukaryotic type
90S particles
Helicases
119072245
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DHX37_C
HA2_C
Helicase_C
DEAD
AAA_22
AAA_19
Flavi_DEAD
ResIII
WHD_HA2
nSTAND3
NB-ARC
T2SSE
nSTAND_NTPase5
Herpes_ori_bp
ATPase
AAA_30
AAA_14
AAA_25
nSTAND6
TrwB_AAD_bind
DUF3885
STPRs
Motif
Other DBs
NCBI-GeneID:
119072245
NCBI-ProteinID:
XP_037033324
LinkDB
All DBs
Position
II:10609061..10613055
Genome browser
AA seq
1172 aa
AA seq
DB search
MGKRKFNAKGRQVVDTIIDDTATKQIKLDIIDAESTEYGGYDPSNALVLPSEKRKTKIKK
DKDNVTRILSKKQRKNLEKIVDKKKKKEGRASLLDRLASVQLPSDELGKYTSIINVQTKG
LKHHLKEKIEKRPSKQEADGDDGQRRRSSVSGSQRKKRLALLNGYADDDDSDDEEKPKDF
NTVGLEDSSSSDSENDETVEAPTIAPAVMDVAVADTVPQVIAAKETSVPAIKPIDETTKP
TPITYRPTVYVHVERTKEIQAARLKLPILSEEQVIMETINENPIIVLTGATGSGKTTQVP
QFLYEAGYAEKKLIGITEPRRVAAISMSKRVATEMNLSTDICSYLIRFEGNVTNKTKIKF
MTDGVLLKELENDFSLTKYSVIILDEAHERSVYTDILVGLLSRIVLLRQKRNDPLKLIIM
SATLRVEDFTNNKKLFKTPPPVLSVEARQFPVTIHFNKRTSEPSRYLKDAYNKAVKIHNT
LPEGGILIFVTGQQDVNYLVRRLRKAFPYRKKDAAKKVENPSEKVSASDDDSDDEMDMKK
AIKNSKKAKKKLHSMLQLPQISLDNYKLPSDDTDADLLDYCSDNDSDDSASEEEDSLNIV
GLNTAQPMWVLPLYSLLPSDKQSRVFDKPPEGTRICVICTNVAETSLTIPNIKYVIDGGL
VKTRLYDKVTGVSSFVVTFTSKAGANQRAGRAGRTAPGHCYRLYSSAVYEDEFADVAVPD
IQKKPVDDLMLQMKCMGIDKVVNFPFPSPPDLVQLETAEYKLKLLGALETAKSSKSEEAT
KVTPLGMAISAFPVAPRFGKMLALSHQQSLLPYTVCIVAALSVQEVLVEVQTTEDQIVKQ
RTEWYRKRKEWAGKGNSLLLGDPIVLLRAVVACESGGKVEDLCKLYGLRPKAITEIRKLR
IQLTNEINLSLSDVILGVDPKMPKPTDHQAKLLRQILLSGMGDQVARRIPDDEKKDSEDR
LRLKYGYRCPEMEEPVFMHSSSVLRKSKPEWVIYQEIFELQNGDARKMFMRGITAIEPEW
LLIYVRSLCNIRSVKEDPPPRYNQQDGKIYCFVEATFGRSGWELPLSEIEMPHTELYYRY
FAMFLLNGDIFPKISEYKKQMRSMPKNIVKSWSKDAPHVLGIVNRLINRQVNSKQKLVDL
WRKESDYLLEEFCNFLVDASPSAIALNWPPIG
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaggaagtttaacgcaaaaggtcgacaagttgtcgacacgatcattgacgac
acagccacaaaacagattaaattggatatcatcgatgcagaatcgaccgaatacggagga
tacgatccatccaatgccttagtgcttccgtctgagaaaagaaaaacgaaaatcaaaaag
gacaaggacaatgtcacaagaattttgtcgaaaaagcagcggaagaatttggaaaaaatt
gttgacaaaaagaagaaaaaggaagggcgcgcttctctgctggacagactagcttcggtt
cagcttccgtctgacgaactcggcaaatacacttcgattattaacgtgcaaacgaaaggt
ctgaaacatcatttgaaggagaaaattgagaagcgaccgtctaaacaagaagccgatggt
gacgatggacaacgtcggcggagcagtgtgtccggtagtcaacgaaaaaagcgattggca
ttgttgaacggttacgctgatgacgatgactccgacgatgaagagaaaccgaaagatttc
aatactgttggtcttgaagacagttcaagctctgacagtgagaacgatgaaactgttgaa
gcacccaccattgcccctgctgttatggatgtagctgtagcagacacagtgccccaagtc
attgcagcgaaagaaacgagtgtaccagcgataaagcctattgatgaaacgactaaacct
acgccaatcacctacagacctactgtctacgttcatgtggaacgaacgaaagaaattcaa
gctgctcgattgaaattgccgattctgagcgaggaacaagtcatcatggaaacgattaac
gaaaatccgataatagttttgactggtgctacgggcagtggaaaaaccactcaggtgcca
cagtttctgtacgaagcaggatatgctgagaagaaattgattggaatcacggaaccgcgt
cgtgtagccgctatttcaatgtccaaacgtgttgccaccgaaatgaacctcagcaccgac
atttgctcgtatttgattcgtttcgaaggaaatgtgaccaacaaaacgaaaatcaaattt
atgaccgacggagtgttgctgaaggaattggaaaatgatttttcactgacgaaatactcg
gtgatcatactcgatgaggcccatgaacgtagtgtttacacggacatattggtcgggctg
ttgtcgcgaatcgttttgctgcgtcagaaacgcaatgacccactgaaactgattattatg
tcggctacgttgcgagtggaggactttacgaataacaagaaactgttcaaaacaccacca
ccggtgttgagtgttgaagctagacagtttcctgttacgatccacttcaataagcgtaca
tccgaaccaagtagataccttaaggatgcatacaacaaagcagtcaagatccataacaca
ctgcccgaagggggaattctgatattcgtaactggacagcaggatgttaattatctggtc
aggcgattgcgaaaggcatttccctatcgtaaaaaagatgcagcgaaaaaagtggaaaat
ccgtcagagaaagtgtcggcatcagatgacgactcggacgacgaaatggatatgaagaag
gcgatcaaaaattcaaagaaagccaagaagaagctgcactctatgctgcaattaccacaa
atcagtctcgacaactacaaattaccatccgatgacaccgatgctgacctactcgattac
tgctctgacaacgacagcgacgactcagcatccgaagaagaggactccttgaacattgtg
ggtttgaatactgcgcagccaatgtgggtgctaccgttgtattcgttgcttccatccgat
aaacaatccagagttttcgataagccacccgaaggaactcgaatctgtgttatttgtacg
aacgttgccgagacatcgttgaccataccaaacataaaatacgtcatcgacggtggtttg
gtgaagacacgactgtacgacaaagtaaccggtgtcagttcattcgttgtgacatttacg
agtaaagctggtgctaatcagcgagcgggtcgagctggccgtacggcacctggtcattgc
tatcgattgtattcgagcgcagtgtacgaagatgagtttgccgatgttgcagttccagac
atccaaaagaaaccggtggacgatttgatgttgcaaatgaaatgcatgggaattgataag
gttgtcaacttcccgttcccgtcaccgccggatttagttcaattggaaacggctgagtac
aagctaaagttattgggagcactcgaaacggctaagtcatctaaatctgaagaagcaacc
aaagtcacaccgctcggcatggcgatttcagcatttccagtcgcacctcgtttcggcaaa
atgttagcgttaagtcatcaacagtcgctgcttccatacacagtatgtatcgtagccgct
ttgtcggtccaggaagtgttagtggaagtgcaaacgacggaggatcaaatagttaagcaa
agaacggaatggtatcgcaagagaaaggaatgggctggcaagggtaattcgttgttactg
ggcgatccgattgtcttacttcgagctgtcgttgcatgcgaatctggtggtaaagtcgaa
gacttgtgtaaattgtacggtctgagaccgaaagcaatcaccgaaatcagaaagcttaga
atacaactaacgaacgaaatcaatttgagcttgagcgatgtcattctgggcgttgatcct
aaaatgcccaaaccaacagatcatcaagcgaaactgttacgtcaaattctactttccggt
atgggcgatcaagtggccagaaggatacccgatgatgaaaagaaagacagtgaagataga
cttcgtttaaagtatggctaccgatgtccggaaatggaagaaccagtgtttatgcattcg
tcgtccgttctaagaaaatcgaaacccgaatgggtgatttaccaggagattttcgagctt
caaaacggagatgctcggaaaatgttcatgcgtggcattacagctatcgaaccggaatgg
ttgctcatttatgtgcgatcattgtgtaacattcgatcggtgaaagaagatccaccgccg
agatacaaccagcaagatggaaagatctactgtttcgtggaagcaacgtttggtcggtca
ggatgggaacttccgttatcagaaattgagatgccacatactgaattgtattacagatat
ttcgctatgtttctgctcaacggagacatatttccgaaaatttcggaatacaagaaacag
atgcgttcgatgccgaaaaatattgtcaaaagttggtccaaggatgcacctcacgttttg
ggtattgtgaataggctgatcaatcgtcaagtgaatagcaaacagaagctagtagatctg
tggcgcaaggagtcggattatctgttggaagaattctgcaactttttggtagacgctagc
ccgtcagcgatcgcattaaattggccacctatcggttaa
DBGET
integrated database retrieval system
