Bradysia coprophila: 119072472
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Entry
119072472 CDS
T08269
Name
(RefSeq) ATP-dependent RNA helicase p62-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119072472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bcoo03041
]
119072472
03009 Ribosome biogenesis [BR:
bcoo03009
]
119072472
Enzymes [BR:
bcoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119072472
Spliceosome [BR:
bcoo03041
]
Complex A
U1 snRNP components
U1 related factors
119072472
Complex B
119072472
Ribosome biogenesis [BR:
bcoo03009
]
Eukaryotic type
Pre-60S particles
Helicases
119072472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Utp25_C
GRP
Motif
Other DBs
NCBI-GeneID:
119072472
NCBI-ProteinID:
XP_037033590
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Position
IV
Genome browser
AA seq
595 aa
AA seq
DB search
MHSNLQRSTMFLRALSTICARTVFAKHCAPIATKYNANLAALYPRFSTFRDFGDNDEYPN
QVRRNTQRNFSSPQFNRNRDFYNNSNKNPEEKPDWKPFEKNFYKPADIIHPKEDVDNFIK
KHKITVKGPAPSPILSFDEVSFPDYIQNKLKGKDFTTPTPIQSQCWPIALSGQNLVGVAQ
TGSGKTLGYILPAIVHIKNQEELKRGEGPIALVLAPTRELAQQIQQVANEFGRTSNVRNA
CVFGGAGKGPQVHALYQGCEIVIATPGRLIDFLDSGVTNLNRCTYLVLDEADRMLDMGFE
PQIRNILERIRPDRQTLMWSATWPKDVRNLAEDFLGSFTQINVGSLELCANHNIKQVVQI
CDEADKQTELQTLLQKIFEENEQPGKILVFAETKRGVDYVARFIQSFGVKCCAIHGNKSQ
TDRDSTLKAFRSGRVNILVATDVAARGLDVDGVTWVINYDYPNTSEDYIHRIGRTGRRDT
TGTAHTFFTESNAGKARDLVAVLLEAKQEVSDDLMEMASRGGPVGSYKRFGGNSFNRNFG
NQSFNRGGGYNNFQRRDSGGGYNNYQRRDSGGGYNNYQRRDNSRNRRRFDDDDDE
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcattccaatttacagcgctccacaatgttcctcagagcactgtcaacaatttgtgct
cggacagtgtttgccaaacattgtgcacccatagcgaccaaatacaacgcaaatcttgcc
gctctatacccacgattttcgacatttcgagatttcggcgataacgatgagtatcccaac
caagttcgccgcaatacacaacgaaatttcagcagtcctcaattcaatcgtaaccgagat
ttttacaacaattccaacaaaaacccagaggaaaaaccagactggaaaccattcgaaaag
aatttctacaaaccggctgacatcattcatccgaaggaagacgtcgacaactttatcaag
aaacacaaaatcactgtcaagggaccggcaccaagtccaattctgtcattcgatgaggtt
tccttcccggactacatacaaaataaattaaagggcaaggactttacgacacccacaccg
atccagtcacaatgttggcccattgcgttgagcggacagaatttagtcggtgttgcccaa
acaggcagcggaaagacattgggatacattttaccggccattgttcacataaagaatcag
gaagaattgaaaaggggagaaggtcccattgcgctcgttctcgctccaactagagaactg
gcacaacagatccaacaagtcgcaaatgaatttggtaggacgtccaatgttcggaacgcc
tgtgtgtttggtggtgccggcaaaggtccacaagttcatgccctgtatcaaggatgtgaa
attgtcattgccactcctggacggctgatcgatttcctcgactctggagtaacgaatctt
aaccgatgcacatacttagtattagacgaagcggatcgtatgcttgacatgggattcgag
ccacaaatacgaaatattttagagagaattcgtccagaccgacagactctgatgtggtcg
gcgacctggcccaaagatgttcgtaacctcgctgaagatttcctcggttcgtttacacaa
attaatgtgggatcgttggagctatgcgctaatcacaacattaaacaagtggtgcaaata
tgcgatgaagccgacaaacaaactgaacttcaaactctcctccaaaaaatcttcgaagaa
aatgaacagccagggaagattctagtatttgccgaaacgaaacgaggtgtcgattatgta
gcacggttcattcagagttttggtgtaaaatgttgtgctatacatggcaacaagtcacaa
acagatcgagacagtacgctgaaagcattccggagcggacgtgttaacattttggtggcg
acagatgtggctgcccgaggcttagatgtcgatggtgtcacctgggtgataaactacgat
tatccaaacacgtcggaggactacattcatcgaataggccgtaccggacgtcgtgataca
actggaaccgcacacacattctttaccgaaagcaatgctggcaaagcaagagatttagtt
gctgtgctgctggaagcaaagcaagaagtgtccgacgatttaatggaaatggctagtcgc
ggtggccctgtaggatcatataagcgattcggtggaaattcattcaaccgaaatttcggg
aatcaatcgtttaatcgcggtggtggatacaacaacttccaaagaagagacagcggtggt
ggatacaacaactaccagagaagagacagcggtggtggatacaacaactaccagagaaga
gataattcgagaaatcgaagacgttttgatgatgatgatgacgaatag
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