Bradysia coprophila: 119072476
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Entry
119072476 CDS
T08269
Name
(RefSeq) ATP-dependent RNA helicase p62-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119072476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bcoo03041
]
119072476
03009 Ribosome biogenesis [BR:
bcoo03009
]
119072476
Enzymes [BR:
bcoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119072476
Spliceosome [BR:
bcoo03041
]
Complex A
U1 snRNP components
U1 related factors
119072476
Complex B
119072476
Ribosome biogenesis [BR:
bcoo03009
]
Eukaryotic type
Pre-60S particles
Helicases
119072476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
119072476
NCBI-ProteinID:
XP_037033597
LinkDB
All DBs
Position
IV
Genome browser
AA seq
512 aa
AA seq
DB search
MFVRSTICTLYHCASIATKYNTNLAALYPRFNRINDIHLKSYKVYQEAPDWRPFEKNFYR
PPDNIHPKEDIDRFISKHKITVNGPAPTPILSFDEYCFPDYVQNELKGKDFTTPTPIQSQ
CWPIALSGQNLVGVAQTGSGKTLGYILPAIVHVKNQEALQKREGPIALVLAPTRELAQQI
QQVANEFGTPSNVRNACLYGGSDKRPQVHALQQGSEIVIATPGRLIDFLDSGMTNLNRCT
YLVLDEADRMLDMGFEPQIRNILERIRPDRQTLMWSATWPKDVRILAEDFLGSFTQINVG
SMELCANHNIKQVVQVCDEAKKRFELQALIQNIHGQDGQPRKILVFAETKQGVDYIGKYI
KSCGIKCSVLHGDKSQKEREHILNGFRSGIVNIVVATDMAARGLDVAGINCVINFDYPST
SEAYIHRIGRTGRGGAPGTAHTFFTENDAERARDLVAVLREAKQEVPDGLMEIANSCSPV
RKRKLFYGNPFSMGNQKLKHGGGHNNSKKQRR
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtgaggtcaaccatttgtactctgtaccattgtgcatccattgctaccaaatac
aacacaaatcttgcggctctgtatccacgattcaatcgtattaacgatattcacttaaag
tcctacaaagtataccaggaagcaccggactggagaccattcgaaaagaatttttacagg
ccgcctgacaacattcatccgaaggaagacatcgacagatttattagcaaacacaaaatc
actgtcaacggaccggcaccaactccaatactttcattcgacgagtattgcttcccagac
tacgtacaaaatgaattaaagggcaaggactttacgacacccacaccgatccagtcacaa
tgttggcccattgcgttgagtggacaaaatttagttggtgtggcgcaaacaggcagtggc
aagacattgggatacattttaccggccattgttcacgtaaaaaaccaggaagcattgcaa
aagagagaaggtcccattgcactggttctagctccaactagagaactggcacaacagatc
caacaagtcgcaaatgaatttggcacaccgtccaatgttcgaaacgcctgtttgtatggt
ggttccgacaaacgtccacaagttcatgcgctgcagcaaggaagtgaaattgtcattgct
actcctggacggctgatcgatttcctcgactctggaatgacgaatcttaaccgatgcaca
tacttagtattggacgaagcggatcgtatgcttgacatgggattcgaaccacaaatacga
aatattttagagagaattcgtccagaccgacagactctgatgtggtcagcgacctggccc
aaagatgttcgtatcctcgctgaagatttcctcggttcgtttacacaaattaatgtggga
tccatggagctatgcgctaatcacaacatcaaacaagtggttcaagtatgcgatgaagcc
aaaaaacgatttgaacttcaagctctcatccaaaacatccacgggcaagatggacagcca
agaaagattttagtgtttgccgaaacgaaacaaggtgtcgattacattggaaagtacatc
aagagttgtggtattaaatgttctgtcttacatggcgacaagtctcaaaaggaacgagag
catatattgaatggattccgcagtgggatcgtaaacattgtagttgctacagatatggct
gcccggggcttagatgtcgctggaatcaactgtgtgataaacttcgattatccaagtaca
tcggaagcctatattcatcgaataggtcgtaccggtcgtggtggtgcacctggaaccgcg
cacacattctttaccgaaaacgatgctgaaagggcaagagatttggttgctgtgcttcgg
gaagcaaagcaggaggtgcccgatggtttaatggaaatagccaatagttgtagccctgta
cgaaagagaaaattattttacggaaatccattcagcatgggaaatcaaaagttgaagcat
ggtggtggacataacaactccaagaaacagcgtcggtga
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