Bradysia coprophila: 119072869
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Entry
119072869 CDS
T08269
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119072869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcoo03019
]
119072869
Messenger RNA biogenesis [BR:
bcoo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119072869
U7-dependent histone pre-mRNA processing factors
119072869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B_2
Lactamase_B
DAC
DUF5097
PglZ_C
Motif
Other DBs
NCBI-GeneID:
119072869
NCBI-ProteinID:
XP_037034069
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Position
IV:2066950..2069631
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AA seq
758 aa
AA seq
DB search
MTSIIKLLAISGSSDESPPCYLLQVDEVRILLDCGWDEKFDPNFIKEIKRHVHTIDAVLL
SYPDPFHLGALPYLVGKLGLNCPIYATIPVYKMGQMFMYDLYMSHYNMYDFELFSLDDID
TAFERIIQLKYNQSVALKGKGYGTITITPLPAGHMIGGTIWKIIKVGEEDIVYAADFNHK
KERHLNGCELEKLQRPSLLITDAYNAKYQQARRRARDEKLMTNILQTLRNNGNVLVCVDT
AGRVLELAHMLDQFWRNKDSGLLAYSLAILNHFSYNVIEFAKSQIEWMSDKLMKSFEGAR
NNPFQFKHLQLCHSLNDLNKISSPKVVLASTPDMESGFTRELFVQWAANPNNSIIITSRS
SQGTLARDLLENGGNGRKIELDVRRRVELEGAELEDYMRTEGERHKLSKLIKQDIDDSSS
DSDDDLEMNIITGKHDIVVRNESMAHSGFFKTSRKQHVMFPFYEEKIKSDEYGEIIQLED
YKMLDVGFDVVMDDNKENTQQVKIEDIKKESDKNKNDCVLVEKPTKCISSRKLIEVNAQV
QFIDFEGRSDGGSLLQILSQLRPRRIVVVRGSPENIDIVSKHCVQSIGARVFTPKKGDIV
DATTETHIYQVRLTEALVSQLFFQRGKDAEIAWMDSAVVVRKKQIAAVGATLDMEVDQEE
PTEVIDDEDQKLLTLAPLEEEDIPPHNSVFVNELKLSDFKQILQKHNINSEFSGGVLWCS
NGTLALKRVDTGKVTMEGCLSEDYYKIRELLYEQYAII
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgataattaaattgctagcgatatctggatcaagcgatgaatcgccaccgtgt
tatctgttgcaagtggacgaagtaagaattttgttggactgcggttgggatgagaaattc
gatccaaattttatcaaagaaataaaaaggcatgtccacaccatcgatgcagtgttactc
tcatatccggatccattccatttgggagcacttccctacctagtcggtaaattaggtttg
aattgtccgatttatgcgaccattccggtgtacaaaatgggtcagatgtttatgtacgac
ctgtacatgtcgcattacaacatgtacgactttgagctgttttcattagacgacatcgac
acggcgttcgagcggataattcaattgaaatacaaccagagcgttgcgttaaagggcaag
ggatacggaacgataacgataacaccgttgccggccggtcatatgattggtggtacgatt
tggaaaatcattaaagtcggcgaagaggacatagtctacgcagccgatttcaatcacaag
aaggagaggcatttgaacggttgtgaattggagaaactgcaacgtccatcactgctgatc
accgatgcctacaatgccaaatatcaacaagccagacgcagagcaagggatgagaaactg
atgacgaatatactgcaaacgttgcggaacaatgggaatgttttagtgtgtgtggacact
gctggtcgtgttttggaactagctcatatgttggaccaattctggcgtaacaaagactcc
ggcctcttggcctactcgttggccatactgaatcatttcagctacaatgtcatcgagttc
gccaaatcgcagatcgaatggatgagcgacaaattgatgaaaagtttcgagggcgcacgg
aacaatccgttccaattcaaacacttgcagttgtgtcacagcttgaacgatctgaataaa
atatccagtccgaaagtggtactggcctcgacgccggatatggaaagtggattcacacga
gaattgtttgtgcagtgggcggcgaatccgaacaacagcatcattatcacatcacgatcg
tctcaagggactctggctcgcgatttactagaaaatggtggaaatggacggaaaatcgaa
ctggatgtgaggcgacgcgtcgaactcgaaggtgctgaattggaagactatatgagaacg
gagggcgaacgacacaaactgtcgaaactgatcaaacaggatattgatgacagtagctcg
gactctgacgacgatttggaaatgaatatcattaccggcaagcatgacattgtcgtgcgg
aacgagagtatggcacattcgggcttctttaaaaccagtcgcaagcagcatgtcatgttt
ccattttacgaggagaagatcaaaagtgacgagtacggcgagatcattcagctggaggat
tacaaaatgctcgacgttggttttgatgtagtcatggacgataacaaagagaacacgcaa
caagtgaaaattgaggatatcaagaaggaatcggataagaacaaaaatgactgcgtcttg
gttgaaaagccaacgaaatgcatcagtagccggaagctgatcgaagtaaacgcccaagtt
caattcatcgacttcgagggtcgatcagatggtggatctctactacaaattctgtcacaa
ctacgcccgcgtcgaattgtggtggttcgtggttcaccagaaaacatagacatagtgtca
aagcattgcgtccagagcattggtgcccgtgtcttcacgccgaaaaagggcgacattgtg
gacgcaacaaccgaaacacacatctaccaggtccgattgactgaggcattggtgtcgcaa
ttgttcttccaaaggggtaaagatgccgaaattgcatggatggactcggcggtggtggtg
cgcaaaaagcaaatagctgcggttggagcgactctcgatatggaagttgatcaagaggag
ccaacggaagtgatcgacgacgaagaccaaaagctactcacattggcaccgctggaggag
gaggacattccgccacacaattcagtttttgtcaacgaattgaaactgtcggatttcaag
caaattttgcagaagcacaacatcaattcggaattttcgggtggtgtgctgtggtgttcg
aatggaacgttggctttgaagcgggttgacactggcaaagtaacgatggaaggatgtctg
tcggaagattactacaaaatccgggagctgctgtatgaacaatatgcgatcatataa
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