Bradysia coprophila: 119073377
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Entry
119073377 CDS
T08269
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119073377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bcoo03041
]
119073377
Enzymes [BR:
bcoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119073377
Spliceosome [BR:
bcoo03041
]
Complex C
Other components
Step II factors
119073377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
WHD_HA2
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
AAA_30
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
119073377
NCBI-ProteinID:
XP_037034697
LinkDB
All DBs
Position
Unknown
AA seq
1241 aa
AA seq
DB search
MEELKQLEHLSLVSKICTELDNHLGLNDKDLAEFIIALAEKHQTFADFKKVLIENGAEFP
DSFITNLLRIIQLMKPPANSSQKPLKFTEKTQELAFKFPGLAIANDPRSKEEEDDDDKKD
VKKAEASVADDMMAQLESFAPKTKDDQEPTAGASSSIKDEKSSRDKRRSRSRERSSSREY
RREHNDKRKARPRSRDRRERSRSRDRRERSRSRDRRERSRSKDRRRHRSRSPKDRRRRSP
SPRRRSRSRHRRSRSRGRDDRSRRNRSPQRSKRSETPLPDDPEPGKIYSGRVANIVPFGC
FVQILGLKKKWEGLVHISQLRSEGRVVDVTEVVSRGQTVKVKVMSIAGQKVSLSMKEVDQ
DNGKDLNPASHGHLKPENDARDRNPDRPVGGTAMLHLQGNMDGEEDQTRKRVTRISSPER
WEIKQMISSGVIDRSELPDFDDETGLLPKDEDDEADIEIEIVEEEPPFLQGHGRALNDLS
PVRIVKNPDGSLAQAAMMQSALAKERREQKMLQREQEMDTIPTSLNKNWIDPLPDDDSRA
LAANVRGVGMAPQEVPEWKKHVIGGKKSSFGKKTDLTLIEQRQSLPIFKLRDDLIKAVTD
NQILIVIGETGSGKTTQITQYLAECGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQ
EVGYTIRFEDCTSPETVIKYMTDGMLLRECLMDFDLKSYSVIMLDEAHERTIHTDVLFGL
LKQAVQKRPEIKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDAS
LITVMQIHLREPPGDVLLFLTGHEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEM
QTRIFDPAPAGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLVVTPIS
QAAAKQRAGRAGRTGPGKCYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDL
LHFDFMDAPPVESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQ
CSDEVLTIVSMLSVQNVFYRPKDKQSLADQKKAKFNQSEGDHLTLLAVYNSWKNNKFSNA
WCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGKNTVRIQKAICSGFFRNASKKDP
QEGYRTLVDSQVVYIHPSSALFNRQPEWVVYHELVQTTKEYMREVTTIDPKWLVEFASSF
FRFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVRRRRN
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcttaagcaattggagcatttgtcgttggtgtcaaaaatctgcacagaattg
gataatcatttgggcttgaacgacaaagatttggcagagttcatcattgcattggctgag
aagcaccaaacattcgccgacttcaagaaagtgctaatcgaaaatggggcagaattcccg
gactcgttcattacgaacttgttgcgaataattcagttgatgaagccaccagcgaatagt
tcacaaaaaccactgaaatttacggagaagacccaagaattggcattcaagtttcccggc
ctagctatagcgaatgatcctcgctcgaaagaagaagaagatgatgatgacaagaaagac
gtcaaaaaagctgaagcatcggttgctgatgatatgatggctcagctggaatcattcgca
cccaaaacaaaagacgaccaggaacctacagctggcgcatctagttcaattaaggatgaa
aagtcaagtcgggataaacgaagaagtcgatcaagagaacgcagtagttcaagagaatat
cgtcgagaacacaatgacaagagaaaagcacgaccacgttccagagatagacgagaaaga
agccgttccagggatagacgagaaagaagccgttcaagggatagacgtgaaagaagccgt
tccaaagatcgtcgtaggcatcgaagtagatcaccaaaagatcgtagacgcagaagtccg
agtccacggcgtagaagtagatcgcgtcatcgtcgaagtcgttctcgcggcagagatgac
cgatcacgccgaaaccgatctcctcagcgatcgaaacgcagtgaaaccccactaccggac
gatccggaaccaggaaaaatttattcgggacgagtggccaatatcgttccatttggctgt
tttgttcagattcttgggttgaagaaaaagtgggaaggtttggtacatatatcacaattg
agatcggaaggacgtgtagtggatgtaaccgaagtggtttctcgtggacaaacggtgaaa
gtgaaggtaatgtcaattgccggccaaaaagtatcattgtcgatgaaagaggttgatcag
gacaatggaaaagatctcaatccagcatcgcacggtcacttgaagccggaaaatgatgcg
cgcgatcgcaatcctgatcgacctgttggcggcacagcgatgttgcatcttcaagggaac
atggacggtgaagaagaccaaacgagaaaacgtgtcaccagaatttcaagtccagagcga
tgggaaattaaacaaatgatttcgtccggagtgattgatcgaagtgaactgcctgatttt
gacgacgaaactggactcctaccgaaagatgaagacgacgaagcagatattgaaatcgaa
attgttgaagaggaaccaccatttttgcaaggtcacggtcgagcattgaatgatctctca
ccagtaagaatagtgaagaatccagacggttctttggctcaagctgcgatgatgcaatcg
gcattggcgaaagagagacgagaacagaaaatgttgcagagggaacaagaaatggatacc
attccgacgagcttgaataaaaactggatcgatccactgcccgatgatgacagccgagcg
ttagcagcaaacgttcgtggtgttggaatggctccgcaagaggtaccagagtggaaaaaa
catgtaattggtggtaagaagtcgtcgtttggcaagaagactgacctgacattgatcgag
caacggcaatcattgccaatatttaagcttcgcgatgacttgataaaggcagtcacagat
aatcaaattttaattgtgattggcgaaactggttcaggtaaaaccactcaaatcactcag
tacttagcggaatgtggattcaccgcacgtggaaaaattggatgcactcaaccgagacgt
gtggcggccatgtcagtcgctaaacgtgtagctgaggagtttggttgtcgtctgggccag
gaagtaggatacaccattcgtttcgaagattgcaccagtccagaaacagtcataaaatac
atgacagacggcatgttgttgcgagaatgtttgatggatttcgatttgaaatcttattcg
gtcatcatgttggatgaggcccatgaacgaacaattcacacggacgttctatttggtttg
ttaaaacaagccgttcagaagcgacctgaaatcaaattgattgtaacatctgcaacgctc
gacgctgtcaaattttcgcaatatttctttgaagcgccaattttcaccatacccggtcga
acgtttcctgtcgaagttctttataccaaggaaccggaaaccgactatttggacgcgtca
ctcatcactgtcatgcaaattcatttacgagaaccgcctggtgatgttttactcttttta
actggtcacgaagagattgacactgcctgcgaaatcctctacgaacgaatgaagtcgttg
ggtccagatgtaccggaattgatcattttaccagtttattcagcgttgccatctgaaatg
cagactcgaattttcgatcctgcacctgctggcagtcgtaaagtagtaattgccacaaat
attgcagaaacatcgttaacaatcgatggaatttactacgtcgtggatccaggttttgtg
aagcagaaggtctataactcgaagactggaatggattccttggtggtaacaccaatatct
caagcggctgccaaacaacgagctggaagagccgggcgtacaggtccaggcaaatgttat
cgtttgtataccgaacgagcatacagagacgaaatgcttccaacacctgtaccagaaata
cagagaacgaatctggctaccacagtactgcaactgaaaacaatgggaatcaatgacttg
ctgcattttgattttatggatgctccacccgttgaatcgttggtgatggcactggagcaa
ctgcattcactttctgcccttgatgacgaaggattgcttacacgactcggtcgacgaatg
gccgaatttccattagagcccaatctgtcgaaaatgttaattatgtcggtggcattgcag
tgttccgatgaggtgttgaccatcgtttcaatgctcagcgttcaaaatgttttttataga
ccgaaagacaaacagtcactggctgatcaaaagaaagcgaaattcaatcaatctgaaggc
gatcacttgacattgctcgccgtgtacaacagctggaagaacaacaaattttcaaatgct
tggtgttacgaaaattttgttcagattcgaacgttgaaacgggcacaggacgtgagaaaa
caattgctgggaataatggatcgacataagctggatgttgtttcagccggaaagaatact
gttcgcattcaaaaagccatttgttctggtttcttcagaaatgcatcgaaaaaagaccca
caagaaggataccggacactggtcgattctcaggtcgtttacattcatccgtcaagtgct
ctatttaataggcaaccggaatgggtcgtctaccatgaattggtgcaaactacaaaggaa
tatatgcgtgaggtgacaacaatcgatccgaagtggctggttgaatttgcttcgtcattt
ttccgattctcagatcctacgaagctaagtaaatttaagaagaaccagcgtctggaacct
ttgtacaacaagtacgaggaacctaatgcttggagaatttcgagggtgagacgtcgacgt
aattag
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integrated database retrieval system
