Bradysia coprophila: 119073656
Help
Entry
119073656 CDS
T08269
Name
(RefSeq) pectate lyase A-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bcoo
Bradysia coprophila
Pathway
bcoo00040
Pentose and glucuronate interconversions
bcoo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119073656
Enzymes [BR:
bcoo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
119073656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
119073656
NCBI-ProteinID:
XP_037035155
LinkDB
All DBs
Position
II:12508900..12510024
Genome browser
AA seq
318 aa
AA seq
DB search
MALKVLLLLTVTILLFQSVRSQIGFATLNGGTNGGAGGPTVTVSTEADLLAAVQGNDRRI
IRITANIRVAGRVRVGSNKSILGATANAGITNGGLFIVDAENVIVRGLFLSFPVDPFDCI
EIQRSSRVWVDHNELFSNRNNGRDFYDGLFDINHGSDLITASWNHFHTHYKVSLIGNSDD
NGSVDSGRLRVSFHHNRFRNLNSRVPSLRFGTAHLWNNLFEDIDSSTINSRMGAQVLVEN
NIFINVRRTIITNLDSREDGFANERNNDWGVAHTLRGPFITRTGTFTSAPYSYQLDNGLG
ANGNIATIVRNGAGKRNF
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcattaaaagtgttgttgctgttgaccgtaacgattttgctattccaatcggttcgc
tctcaaattggttttgctacgttaaatggaggtacgaatggcggagcaggtggccctaca
gtaactgtgtctacggaagctgacttactagctgctgtacagggaaatgacagacgcatc
atacggataacagctaatattcgagtcgctggccgtgttcgtgttggatcgaataagtcc
attttgggagctactgccaatgcaggaataaccaatggcggtttatttatagtcgacgca
gagaatgttattgtcagaggtctcttcttatcgtttcccgttgatccattcgattgtatc
gaaatacagagatcgtctcgagtttgggtcgatcacaacgaactgttttccaataggaat
aatggcagagacttttatgacggtcttttcgacatcaatcacggatccgatctgatcaca
gcctcatggaatcatttccacactcactacaaagtcagtctgattggtaattccgatgac
aatggatcggtggacagtggtcgattacgtgtatccttccatcataatcggttccgcaat
cttaactcgcgcgttccatcacttcgtttcggtaccgctcacctttggaacaatctgttc
gaagacatcgattcgtcaacaataaacagccgaatgggagcccaagttctcgtcgaaaat
aatattttcatcaacgtacgtcgcacgatcatcaccaatttggacagtcgagaagatgga
tttgccaatgaacggaataacgattggggagtggcgcatacgttacggggtccgtttatc
acacgaaccggaacgttcacaagtgcaccgtactcctatcaacttgataatggattgggt
gcgaatggaaacattgctacgattgtacgtaatggggcaggtaaacgaaatttctga
DBGET
integrated database retrieval system
