KEGG   Bradysia coprophila: 119073862
Entry
119073862         CDS       T08269                                 
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
bcoo  Bradysia coprophila
Pathway
bcoo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bcoo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    119073862
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcoo03019]
    119073862
Messenger RNA biogenesis [BR:bcoo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     119073862
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_WDHD1_1st WDR55 CSTF1_dimer Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_Aladin WD40_RFWD3 Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_WDR75_1st ASA1 Beta-prop_DCAF4 Beta-prop_VPS8 Beta-prop_NOL10_N Beta-prop_SCAP Beta-prop_TEP1_C PAC11 DSE1_N Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Beta-prop_WDR19_1st CFAP251_N WDR90_beta-prop_4th Beta-prop_Vps41 Ge1_WD40 Beta-prop_IFT140_2nd Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_NWD2_C WDR54 Lactonase Beta-prop_IP5PC_F Beta-prop_EDC4L eIF2A Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 119073862
NCBI-ProteinID: XP_037035622
LinkDB
Position
Unknown
AA seq 426 aa
MQEVLESRNIIKSRETLYRLMISQLFYDSHHNLAVELSNIIRADPPCPPSDKLLHLTIDA
LQNEMPKENLNYNESFAGIDLEYETEGSCLAPEPSSYETAYVTSHKQACRSGAFSHDGQL
VATGSVDASIKILDVDRMLAKSAPEDMDPSRIGDQQGHPVIRTLYDHTEEVAYLEFHPKE
QILASASRDCTVKLFDISKASVKKAHKVFTDVVGVRCLSFHPTGDYMIVGTDHEVLRVYD
INTSQCFVSAIASQQHTSSVTCVKYALTAKMYASGSLDGSIKLWDVVSGRCINTFSQAHE
GAEVCSVTFSKNGKYLLSSGKDSLVKLWELSTSRCLIAYTGAGTTGKQEHNTQAVFNHTE
DYILFPDEATTSLCSWNSRNASRLHLMSLGHNGPIRFIIHSPTHPAFLTCSDDFRARFWF
RRTNAP
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgcaggaggttcttgagtcaagaaatataattaaaagcagagaaactctgtaccggctt
atgatcagtcagctgttttacgattcgcatcacaatttggccgtagagctgtcaaatata
atacgagccgatccgccatgtccacccagcgacaaattgctgcatctcacaattgatgct
ctccaaaatgaaatgcccaaagagaatctaaactacaatgaatcattcgccggcatcgac
ctggaatacgaaacggaaggttcatgtttagcacctgaaccgtcatcctatgaaaccgcc
tacgttacctcacacaagcaggcttgtcgttccggggctttcagtcacgatggtcagctc
gtggcgactggaagtgttgacgctagtatcaaaatcttggatgtggacagaatgttggct
aaatcggctccggaagacatggacccatcccgaattggtgatcagcaaggacatccagtt
attcgtacgctgtacgatcatacagaagaggttgcttacttggaattccatccgaaggaa
caaattttagcttcggcatcgcgtgattgtaccgtcaaattgttcgacatatccaaggca
tcagtgaagaaagcacacaaagtgttcacggatgtcgttggtgttcgatgcctatcgttc
catccgaccggtgactacatgattgttggcaccgatcacgaagtattgcgagtctatgat
atcaacacttcacagtgctttgtgagcgcgattgcatcccagcaacacacttccagcgtg
acttgtgtcaagtatgcactaactgctaaaatgtacgctagtggaagtttggatggatca
ataaagttgtgggacgtggtcagtggtcgatgtatcaacaccttttcccaagctcatgaa
ggcgctgaagtctgttcagttacattttctaaaaacggaaaatacctcctttcctctggt
aaagattcgctcgtcaagctctgggaattaagtaccagccgatgtcttattgcatacact
ggagccggtacaaccggcaaacaagaacacaacactcaagcggttttcaatcataccgaa
gactacattcttttccccgacgaagctacaacgtcactttgctcatggaactctcggaac
gcatctcgattacatttgatgtcattgggccataatggtcccatacgatttatcattcat
tcgcccactcatccagcattcctgacgtgttcggacgattttcgagctcgcttttggttc
aggcgaacgaatgcaccataa

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