Bradysia coprophila: 119074129
Help
Entry
119074129 CDS
T08269
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119074129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcoo03021
]
119074129
03041 Spliceosome [BR:
bcoo03041
]
119074129
03036 Chromosome and associated proteins [BR:
bcoo03036
]
119074129
Transcription machinery [BR:
bcoo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
119074129
Spliceosome [BR:
bcoo03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
119074129
Complex B
119074129
Complex C
U2 SnRNP specific factors
119074129
Chromosome and associated proteins [BR:
bcoo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
119074129
TFTC complex
119074129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
119074129
NCBI-ProteinID:
XP_037036011
LinkDB
All DBs
Position
II:12957905..12967370
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRSTTITHAVHGSFSGTKSQEILISRGKSLELLRPDPNTGKVYTLLTTEIFG
VIRSLMSFRLSGGSKDYAVVGSDSGRIVILEYIPAKNILEKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDNEARLTISSPLEAHKSSTLTYHMVGVDVGFENP
MFACLEIDYEKADADPTGEAAQRTQQTLTFYELDLGLNHVVRKYFEPLEEHANFLISVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFIASATHRTKSMYF
FLVQTEQGDIFKVTLETDDEVVSEIKLKYFDTVPPATAMCVMKTGFLFVASDFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRALKNLVMVDELHSYAPILGSHVADLANEDT
PQVYLLCGRGPRSSVRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAYIIVSFVN
ATLVLSIGDTVEEVTDSGFLGTTPTLCCSSLGDDALVQVYPDGIRHIRADKRVNEWKAPG
KKTITKCAVNQRQVVVALSGRELVYFEMDPTGQLNEYTERKKMPSDVMCMALGTVPSGEQ
RSWFLAVGLSDNTVRIISLDPSDCLAPRSMQALPSCAESLCLVEMGTSDSNEEGKTHSIG
SLYLNIGLNNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIKMQGAEAVLAMSSRTWL
SYYYQNRFHLTPLSYETLEYASGFSSEQCAEGIVAISTNTLRILALEKLGAVFNQITFPL
EYTPRRMLVHQDTARLIIAETDHNAYTEETKTVRKAQMADEMREAAGEDEQELANEMADA
FINEILPEDVFSAPKAGNAMWASHIRIMDPVHGHTLNKYRLAQNDAIMSMALLKFHAVMD
GRWYLAVGVAKDFHLNPRQNGGGAIDVYRVDPTCSSLEFIHRTEMDEVPGALCGFQGRLI
AGIGRILRIYDLGKKKLLRKCENKHIPNQIVNIQTMGQRIYVSDVQESVFFVRYKRPENQ
IIIFADDTHPRWITATTLLDYDTIATADKFGNVSILRLPHSVTDDVDEDPTGTKSLWDRG
LLSGASQKAENIATVHIGEIVMSLQKATLIPGGSEALLYTTLSGAVGALVPFSSREDYDF
FQHLEMHMRNENPPLCGRDHISYRSYYYPIKNVMDGDLCEQFTSLDIGKQKTIATDLGRT
PNEVAKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcttatataatctcactcttcagcgttccaccaccatcacacatgccgtccacggt
agtttctctgggacaaagtcccaggaaatactcatatcacgaggcaaaagcttggaactg
ctacgacccgatccaaataccggcaaagtgtacacactgctcaccaccgaaatatttggc
gtcatccgatcgttgatgtcattccgattgtcgggcggatcgaaagattatgctgtcgtc
ggttccgattccggtcgtattgtcatattggaatatattccggcaaaaaatattctggaa
aaagtccatcaggaaacgttcggcaaatccggatgtcgtcgcatcgtgccgggtcaatat
ttggccatcgatccgaagggtcgtgctgttatgattggagcgatcgaaaagcagaaattg
gtctacattctgaacagagacaacgaggctcggttgaccatttcgtcgccactggaagct
cacaaatccagtacgttgacttatcacatggttggcgtcgatgttggcttcgagaatcca
atgtttgcgtgcttggagattgactacgagaaagccgatgcagatcctacaggcgaagca
gctcaacgaacacaacagacgttaacgttctacgaactcgatctgggtctgaatcacgtc
gtgcgcaaatatttcgaaccattggaagagcacgccaattttctgatctccgtacctggt
ggaaatgatggaccatccggcgtgctaatttgctccgaaaattatctgacctacaaaaat
ctcggcgatcagcacgacattcgttgcccgattcctcggcgacgtaacgatctggacgat
cccgagcgtggaatgatattcattgcgtcggctacgcatcgcaccaaatcgatgtatttc
tttttggtgcagaccgaacagggtgacatattcaaggtgacgctggaaacggacgatgaa
gtggtgtcggaaatcaaattaaagtacttcgatacggttccgccagccacagcaatgtgt
gtgatgaaaacgggtttcctgtttgtcgcttcggatttcggcaaccattacttgtatcaa
atcgcccatctcggtgatgacgacgatgaacccgagttcagttccgctatgccattggaa
gaaggcgatacatttttcttcgcaccaagagcactgaaaaatttggtcatggtcgatgag
ctacattcgtacgcgccaattttgggatcccatgtcgccgatttggccaatgaagacaca
ccgcaagtgtatctgttatgcggtcgtggaccccgatcatcggtacgtgttttgcgtcac
ggtttggaagtatccgaaatggctgtctcagaattgcccggcaaccccaatgctgtgtgg
acagtgaagaaaagaattgatgatgagttcgacgcttacattatcgtatcgttcgtcaat
gcgactttagtactgagtatcggcgacacggtcgaagaagtgacggatagtggtttctta
ggcacaacaccgacactatgctgttcgtcattgggagacgatgctcttgttcaggtctat
ccggatggtattcgtcatatccgagctgacaagcgtgtcaacgaatggaaggcacctggg
aagaagacgattaccaaatgtgctgtcaatcagcgtcaagttgtggttgctttatctggc
agagaattggtttatttcgaaatggatccgacgggtcaactgaacgaatataccgaacgg
aaaaagatgccatcagatgtgatgtgtatggcattgggaaccgtgccatctggcgaacaa
cgttcatggttcctcgccgtaggattgtctgacaacaccgttcgaatcatatcgttggat
ccatctgattgtttggcaccacgatcgatgcaagcgttaccgtcgtgtgccgaatcgttg
tgtttggtcgagatgggtacgtctgacagcaatgaagagggaaaaacgcacagcatcggt
tcgttgtatttgaacattggtctgaacaacggtgtcctgctgcgaacagtattagatcca
gtatccggtgatttggctgacacacgaacgcgatatcttggctcgcgaccggtgaaactg
tttcgaatcaaaatgcaaggggcagaagcagttttggcaatgtctagtcgtacgtggttg
agttactattaccaaaatcgattccatttgacgccattgtcctatgaaacattggaatat
gcgtccggattttcgagtgaacagtgtgccgaaggtattgttgccatctcgacaaacact
ctgagaattttggcactggaaaaattgggcgccgtattcaatcagattacatttccgttg
gaatacactccgagacgtatgttggtgcatcaagatacggcaaggttaatcatagctgaa
acggatcacaacgcatacacggaagagactaagacagtacgtaaggctcaaatggctgat
gaaatgcgagaggctgccggtgaagatgaacaagaattggccaatgaaatggctgacgcc
tttatcaatgaaattcttcccgaggatgtgttttccgctcccaaagccggcaatgcaatg
tgggccagtcacattcgaattatggatccagtacacggccatacactgaacaaatacaga
ttggctcaaaatgacgccattatgtcgatggctttgctgaaatttcacgctgtaatggat
ggtcgctggtatctagcggtcggtgttgccaaagatttccatttgaatccacgacagaat
ggtggtggagcaattgatgtgtacagagttgatccaacgtgttcaagtctggaatttatt
catcgaactgaaatggatgaggttcccggtgcattgtgtggtttccagggacgattaatt
gccggcattggtaggattctaagaatatacgatttgggaaagaagaagctgctgcgaaag
tgcgaaaacaaacacattcccaatcaaattgttaacatacaaacgatgggccagcgcatc
tacgtatctgacgtgcaagaatcggtattcttcgtccgatacaaacgacctgaaaatcaa
ataataattttcgccgatgacacacacccacgatggatcaccgccacgacacttctggac
tacgatactattgcaacggccgacaaattcggaaacgtttccattctccgattgccgcat
tccgtaaccgacgatgtcgatgaagatcctaccggcacaaaatcactgtgggatcgtggt
ctgctcagcggtgcatcccaaaaggccgaaaacattgcaactgtacacattggcgaaatt
gtcatgtcgctgcaaaaggcaacgttgattccgggtggttcggaagctttgttgtacaca
acactcagtggtgcagtcggtgcattggttccgttctcaagtcgcgaagattatgacttc
tttcagcatctggaaatgcatatgcgaaacgagaatccaccgttgtgtggacgagatcac
atcagttaccggagttattactatccgattaagaacgtaatggacggtgatctatgcgaa
caattcacttcgctggatattggcaaacagaaaacaattgccaccgatctgggacgtaca
ccgaacgaagtggccaaaaagctggaagacattcgtacccgatatgcgttctaa
DBGET
integrated database retrieval system
