Bradysia coprophila: 119075607
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Entry
119075607 CDS
T08269
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
bcoo
Bradysia coprophila
Pathway
bcoo04120
Ubiquitin mediated proteolysis
bcoo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119075607
04120 Ubiquitin mediated proteolysis
119075607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bcoo04121
]
119075607
Enzymes [BR:
bcoo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119075607
Ubiquitin system [BR:
bcoo04121
]
Ubiquitin ligases (E3)
U-box type E3
119075607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
INTS5_N
Motif
Other DBs
NCBI-GeneID:
119075607
NCBI-ProteinID:
XP_037037979
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MSELTPEEMRARRLRRLGIAPVVQSPPPLSEPPTIEPTHSKDDLTFDAQKNKISSTTHGS
IEIDENEHKQKQIKFDEDVDVRQKTDCIFNNNEESLLIKTSNLAGTSRLIKQDENVLNRN
VDNIPTECESESNRMEIDENCCETVAAVERMETEDTHQSAQKRSEKQFQPEEPAVDERTL
CLSRILDAFWDDYCVGKIIVSETAFNRSEDDASASINYEDLASQILVEIAIEYFEGKLVD
VKDSPENDKWKSASSSSAADCPVPMLQPFNPANEAVFKYFMGAFTRCEQQFVKYSDAHAA
KKFDSVTLRDILTMIGNVKLQIIRYTIMLLVNKLRPMTKDSPKRSGKSPLLQLLLQNDIP
SDFLRYIVDESSKNPSDFNAIFDEVVNSLNLYMQSNTATDGKLNATPIFALNELLNVTLI
NEPNVRPVCNLIAKKKNFYPTLTTEYTGREITRTSFLGPFLSMSVFSEDNPRLLDDESKP
EIEHVSDNLRSQLEGMRATLHTVFHNLLKNVESRNGVLMYFSAILKHNDKRTQFHADDKT
LARDGFMINVMCVLQKLSIKIKLERVDPMYPFHWESMINISKDTKLRYDETEYKEWTDSL
RNGLSGVKWEQVNFQTHCWFLTLHGHHLAILPAIQRYNKRLRAIKEIRRMLQELNNTKSH
WENSVNAGRNKDLIERWNHQLKKLNKSKVCCDIGLIDPHVIRQCFHFYSTVCEFILYQME
GRKPEGPFITSIAPNIIKPTEAFSALPEWYVEDIADFLLFAMQYTPQIIGEVFDHSIITW
LLTCICAPQCIKNPYVTAKLVEVLFIVSLNVHSNTALHSAIMNHGLAQTVLISSLMKFYT
DIETTGQSTEFYDKFTIRYHISHLFKGMWESAIHRQAMIDESKTGKQFVKFINMLMNDTT
FLLDECLVYLKRIHETQALMMNETEWAAIGTENQHQRQRQLSQDERQCRSYLTLAKETVD
MFHYLTVDIKEPFLRSELVDRLTSMLNYNLHQLCGPKCNNLKVRSPAMYGWEPRKLLGQI
FDIYLHLNCDKFAASLAADERSFEVHLFADAADRIQRLQIRSVVEVEQFRHLMAQAHDIY
VANQENEDEYADAPDEFRDPLMDTLMCDPVLLPSGKVMDRSIITRHLLNSNTDPFNRQPL
TEEMLLADVELKERIIAWKREKRDKKLQMSVNPNVKS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaattaactcccgaggagatgagagcccgtcgtctgcgacgactcggcatcgca
cctgtggtacagtcaccaccgccactaagtgaaccaccgacaattgaacctacccactca
aaagacgatttaacatttgatgctcaaaagaataaaatatcatcgacaacgcatggatcg
atagagattgatgaaaatgaacataagcaaaagcaaatcaaattcgatgaggatgtagat
gttcgacagaagacagactgcatatttaacaataacgaagaatcactattaatcaaaaca
tcgaatttggctggtacttctcgtttaatcaaacaggacgagaatgtccttaatcgaaat
gtggacaatattccaacagagtgcgagtctgaatccaatcgaatggaaatcgacgaaaat
tgttgcgaaactgtagcagctgttgagagaatggaaaccgaagacactcatcagtcggcg
caaaaaagatctgaaaaacaattccaacccgaagaaccagcagtcgatgaacgaaccttg
tgtttgtcgcgtattttggatgcattttgggatgattactgtgtgggaaaaatcatcgta
tcagaaacggcatttaatcgctctgaagacgatgccagtgcatcgataaattacgaagat
ttggcatcgcagattctggttgaaatcgcaatcgaatattttgaaggtaaattggttgac
gtgaaggattcaccggaaaatgataagtggaaatcagcaagctcatcgagtgctgccgac
tgtccagtaccaatgttgcagccatttaatccagcaaacgaagctgttttcaaatatttt
atgggcgcatttactcgttgcgaacaacaatttgtcaagtacagcgatgcccatgcggct
aagaaattcgatagtgttacactccgggatatactgacaatgattggcaatgttaagcta
caaatcattcggtacacaataatgctcctggtaaataaattacgaccaatgaccaaggac
tcaccaaaacgttcagggaaaagtcctctacttcagctgctgcttcaaaatgatattcca
tccgattttcttcgttacatcgtagacgagagttccaaaaatccaagcgatttcaatgca
attttcgatgaagtggtcaatagcctgaacctatacatgcaatccaacacagcgactgat
ggaaaactcaatgcaacaccgatttttgcactgaacgaattgctaaacgtcaccttaatc
aatgagccaaatgttcgaccagtttgcaatttaatagcgaaaaagaagaacttctatcca
acactaacgacagaatataccggacgtgaaatcaccagaacaagcttcttgggaccattt
ctgtcgatgtcagtgttttctgaggataatccacgattgttggacgacgaatcgaagccg
gaaatcgaacatgtctcggataatctacgatcgcaattggaaggcatgcgtgcaacactg
cacacggttttccataatctattgaagaacgtggaaagtcgtaatggggtgttgatgtat
ttctcagcgattttgaagcacaacgataagcgcactcaatttcatgctgatgataaaacc
ctagcccgagacggtttcatgatcaatgtaatgtgtgtgctgcagaaactttcgattaaa
atcaaactcgaacgcgtcgatccaatgtatccctttcattgggagtccatgatcaatatt
tccaaggacacgaaattgcgttacgatgagactgagtacaaggagtggactgattcgcta
agaaacggtctttctggtgtaaaatgggaacaagttaatttccaaacacattgctggttc
ctcacacttcatggtcatcacttagctatactgccagctattcagcgttacaacaaacgt
ctacgagcgatcaaagaaattcgtcgtatgttacaggaactgaataacaccaaatcacac
tgggaaaattctgtgaatgctggtaggaataaggatctcattgagcgatggaatcatcaa
ctgaagaaactcaacaaatctaaagtctgctgtgatattggtctcattgacccgcacgta
attcgtcaatgtttccacttctacagtacggtatgcgagttcatcttatatcaaatggaa
ggccgtaagcccgagggcccgttcataaccagcattgcaccgaatataattaaaccaacg
gaagcattttcagcactgcccgaatggtatgtggaggatattgccgatttcctactattc
gcaatgcaatacactccgcaaattatcggtgaagttttcgatcactcaatcatcacgtgg
ttgctgacgtgtatttgcgccccacaatgtatcaagaatccctatgtcacggcgaaattg
gttgaagtgttattcattgtatcgttaaacgttcactccaataccgcattgcattcggct
ataatgaaccatggactcgctcaaacggtcctgattagctctcttatgaaattctacact
gatattgaaaccaccggacaaagtactgagttttatgataaatttacaataagataccat
ataagtcacctgttcaagggcatgtgggaaagtgcaattcaccgtcaggccatgattgac
gaatcgaagactggaaaacaatttgtcaaattcatcaatatgctcatgaatgacacaacc
ttcctactggacgaatgtcttgtttatttgaaacgaatccatgagacacaagcgctaatg
atgaatgaaacggaatgggccgcaatcgggaccgaaaatcagcatcaacgccagcgccaa
ttgagccaggacgaaagacagtgtcgatcgtatctaacgttggctaaggaaacggtggac
atgtttcactatctaaccgttgatattaaggaaccatttttacgttccgaattggtggat
cgtttgacatcgatgttgaactataatctgcatcaattgtgcggaccaaagtgtaataat
ttaaaggttagaagtccggcgatgtatggctgggaaccccgaaaactgctcggacaaatt
ttcgatatttatttacatttgaattgtgataaatttgctgcatcgctggcggccgatgaa
cgttcatttgaagtacatctatttgcggatgccgctgatcgcattcaacgattacaaatt
cgttcggttgtcgaagtggaacaattccgacatctaatggcacaggcccacgatatttat
gtcgcaaatcaagaaaatgaagacgagtacgccgatgctccagatgaattccgtgatccc
ctgatggacacgctaatgtgtgatccagttttgttgccgagtggaaaagtgatggatcgt
tcaattatcacacgacatttgcttaatagcaatacagatccgttcaatcgacaaccatta
actgaagaaatgttacttgctgatgtcgagctaaaagagcgcatcatcgcatggaagcgt
gaaaaacgagataagaagctgcagatgagtgtgaatcccaatgtgaagagttaa
DBGET
integrated database retrieval system
