KEGG   Bradysia coprophila: 119075991
Entry
119075991         CDS       T08269                                 
Name
(RefSeq) spliceosome RNA helicase DDX39B-like
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
bcoo  Bradysia coprophila
Pathway
bcoo03013  Nucleocytoplasmic transport
bcoo03015  mRNA surveillance pathway
bcoo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bcoo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119075991
  09122 Translation
   03013 Nucleocytoplasmic transport
    119075991
   03015 mRNA surveillance pathway
    119075991
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcoo03019]
    119075991
   03041 Spliceosome [BR:bcoo03041]
    119075991
Enzymes [BR:bcoo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     119075991
Messenger RNA biogenesis [BR:bcoo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     119075991
Spliceosome [BR:bcoo03041]
 Complex C
  Other components
   EJC/TREX
    119075991
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    119075991
SSDB
Motif
Pfam: DEAD CMS1
Other DBs
NCBI-GeneID: 119075991
NCBI-ProteinID: XP_037038460
LinkDB
Position
Unknown
AA seq 242 aa
MADNQDERKVEQVVDGTAASPEKVANSACVSIFNSDFCDFIRKPEILRAIDDCGFEYPFK
LQYKFMPQAVVGMDILCQAQSEAGKTTGFVLATLQQVESTADHVCALVICNKRVRAFHIS
QKYELFGGYMPALNVAVFIGGLPVKRDEELLKTMTPHIVVGTPGRILALVRSKRLILKRL
KHIIVDDCGTSLEQMDMRRNIVEIFRNTPSEKQVMMFSTSSLSEESRATCRKFMHSDAIE
IQ
NT seq 729 nt   +upstreamnt  +downstreamnt
atggctgacaatcaagatgaaagaaaagtcgaacaagttgtcgatgggacggctgcatca
ccggaaaaagttgcaaactccgcctgtgtgtctattttcaattcggatttttgtgatttt
atccggaagccggaaattctacgtgcaatcgacgattgtggtttcgaatatcctttcaag
ttgcaatacaaatttatgccacaggccgttgttggcatggacattttgtgccaagcacaa
tcagaggcgggaaagacgaccggatttgttttggccacattacaacaagtcgaatcgacc
gcggaccatgtgtgcgcactggtcatatgtaataaacgtgtgcgagcgttccacatcagc
cagaagtacgaactttttggcggatatatgccagcattaaatgttgccgtattcatcggt
ggtctgcccgttaaacgggacgaagaattgctgaaaacgatgacgccgcacattgttgtt
ggaacgccgggtcgcattttggctctcgttcgcagcaagagacttattttgaagcgactg
aaacatatcattgtcgacgactgtggaacgtcgttggagcaaatggatatgcgtcgcaac
atagttgagattttccggaatacaccgagtgaaaaacaagtgatgatgttttcaacgtcc
tcactgagcgaggaaagtcgtgccacctgcaggaaatttatgcattctgatgcaattgaa
attcaataa

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