KEGG   Bradysia coprophila: 119076103
Entry
119076103         CDS       T08269                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
bcoo  Bradysia coprophila
Pathway
bcoo03030  DNA replication
bcoo03410  Base excision repair
bcoo03420  Nucleotide excision repair
bcoo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bcoo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    119076103
   03410 Base excision repair
    119076103
   03420 Nucleotide excision repair
    119076103
   03430 Mismatch repair
    119076103
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bcoo03032]
    119076103
   03036 Chromosome and associated proteins [BR:bcoo03036]
    119076103
   03400 DNA repair and recombination proteins [BR:bcoo03400]
    119076103
DNA replication proteins [BR:bcoo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    119076103
  DNA Replication Termination Factors
   ELG1-RFC complex
    119076103
Chromosome and associated proteins [BR:bcoo03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    119076103
DNA repair and recombination proteins [BR:bcoo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     119076103
  Check point factors
   HRAD17(Rad24)-RFC complex
    119076103
SSDB
Motif
Pfam: AAA Rep_fac_C RCF1-5-like_lid DNA_pol3_delta2 AAA_16 AAA_24 AAA_22 AAA_11 AAA_assoc_2 Rad17 Mg_chelatase AAA_30 AAA_14 DUF815 bpMoxR AAA_5 RuvB_N AAA_19 SLFN-g3_helicase Gp44_lid AAA_7 ATPase_2 ResIII IFRD Kinesin BT_3535-like nSTAND3
Other DBs
NCBI-GeneID: 119076103
NCBI-ProteinID: XP_037038657
LinkDB
Position
Unknown
AA seq 359 aa
MHAFLKNSKGLSKDKTKSNQESSTVNRKKTPAPWVEKYRPKSVDDVVEQGEVVAVLKQCL
SGADLPNLLLYGPPGTGKTSTILAAARQLFGDIYKDRILELNASDERGINVVRTKVKNFA
QLTASATRPDGEPCPPFKIIILDEADSMTHAAQAALRRTMEKESRTTRFCLVCNYVSRII
QPITSRCTKFRFKSLSEQRIIERLQFICKEESVSVDDDVYKNIVDISGGDLRRAITMLQS
VYRLKGGQSVQITAGDILEISGVIPNRYLDELLGICRSGNYTNLEKYVEDIINEAFSIGQ
LFDQLCDFIIQHPDISNKQKSVICDTLGKCCFRLEDGGSEYLQIMDLGCTIIKAMQLSA
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgcacgcattccttaaaaatagcaaaggcttgtcgaaggataagacaaagtccaatcaa
gaatcatcgaccgtcaatcgaaagaaaacaccggctccgtgggtcgagaaatatcgccca
aagtcggttgacgatgttgtggaacaaggtgaagtggtggctgtattaaaacaatgtcta
agtggagcggatctacccaatttacttctctacggaccaccaggcaccggtaagacgagt
accatcttggctgctgcacgacagttattcggcgatatttacaaagaccgaatattggaa
ttgaatgcttcggatgagcgaggtataaatgttgttcgtaccaaagtgaagaactttgca
caattaactgccagcgcaacacgacctgacggcgaaccttgtccaccttttaaaataatc
attttggacgaggctgattcaatgacccatgccgcccaggccgcccttcgtcgtaccatg
gaaaaggagagtcgcacgacaagattttgtctggtctgcaattatgtgtcccgaatcata
cagccgattacgtcccgttgcaccaaatttcgattcaaatcgctgagcgagcaacgaatt
atcgaacggctccaattcatatgcaaagaggaatcggtttccgtcgacgacgatgtttac
aaaaatattgtcgacatttcgggcggtgatttgcgccgggctatcacaatgctgcagtcg
gtctatcgcctgaaaggtggccaatccgttcagatcaccgccggcgatatactggaaata
tccggcgtcataccgaatcgatatctggatgaattgttgggcatctgccggtcgggaaat
tatacgaatctggagaagtatgtggaggatattatcaacgaagcgttcagcattggccag
ctgttcgatcagttgtgcgactttatcattcagcatccggacataagcaacaagcagaag
agtgtcatttgcgatacgttgggtaaatgttgttttcgtctggaggacggtggttcggag
tatcttcaaataatggatctcggatgtacgatcatcaaggcaatgcaattgtcagcgtag

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