Bradysia coprophila: 119076419
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Entry
119076419 CDS
T08269
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03013
Nucleocytoplasmic transport
bcoo03015
mRNA surveillance pathway
bcoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119076419
09122 Translation
03013 Nucleocytoplasmic transport
119076419
03015 mRNA surveillance pathway
119076419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcoo03019
]
119076419
03041 Spliceosome [BR:
bcoo03041
]
119076419
03009 Ribosome biogenesis [BR:
bcoo03009
]
119076419
03012 Translation factors [BR:
bcoo03012
]
119076419
Enzymes [BR:
bcoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119076419
Messenger RNA biogenesis [BR:
bcoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119076419
mRNA cycle factors
Stress granule specific factors
119076419
Spliceosome [BR:
bcoo03041
]
Complex C
Other components
EJC/TREX
119076419
Ribosome biogenesis [BR:
bcoo03009
]
Eukaryotic type
90S particles
Helicases
119076419
Translation factors [BR:
bcoo03012
]
Eukaryotic type
Initiation factors
eIF-4
119076419
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Cas3-like_C_2
TniB
UvrD-helicase
Utp25_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
119076419
NCBI-ProteinID:
XP_037039057
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MARRGEDLSNVEFETSEDVQVVPTFNSMGLREELLRAIYAYGFEKPSAIQQRSILPIIKG
RDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLCLSPTRELAVQIQKVILALGDFMNV
QCHACIGGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRSIKMLVLDEADEMLNK
GFKEQIYDVYRYLPPATQVCLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFF
VAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKE
RDEIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKG
VAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggctcggcgaggtgaagatttatcgaatgtggaattcgagacaagtgaagatgtgcag
gtcgtaccaacgttcaattcgatgggactacgggaggaactgttgagagctatctacgca
tacggtttcgaaaaaccatcggcaatccaacagagaagtatccttccaatcattaaggga
cgcgatgttatcgctcaagcacaatctggtaccggtaaaactgccacattttcaatttcg
atactgcaatcgctggacacaacattacgtgaaacgcaagtcctgtgcctgtcaccgact
cgtgaattggccgtccagattcaaaaggtcatattggcgttgggcgacttcatgaacgtt
cagtgtcatgcctgcatcggtggcacaaatctgggcgaagacattcgtaaattggactat
ggacagcatattgtcagtggaacaccgggccgtgtgtttgacatgatcaagagacgtgtg
ctgcgaacgagatcgattaaaatgttggttctggacgaggctgacgaaatgttgaacaaa
ggtttcaaggagcaaatctacgatgtgtatcgctacttgccgcccgccacacaggtatgt
ctaatatcagccacactaccgcacgagatccttgaaatgacatcgaaattcatgaccgat
ccgattcgcattcttgtgaaacgcgatgagttgacgctggagggaatcaaacagtttttc
gttgctgtggaacgagaggaatggaaattcgacacgttgtgcgatctgtacgacacattg
accattacacaggcggtcattttctgcaatacgaaaaggaaggtcgattggttgaccgag
aagatgcgcgaggcgaatttcaccgtcagttcgatgcacggtgacatgccgcaaaaggaa
cgtgatgagattatgaaggaattccgttccggacagagtcgcgttctgatcaccacagat
gtgtgggctcgtggtatcgatgtgcagcaagtgtcgctggtcattaactacgatttgccg
aacaatcgtgaattgtacattcatcgtatcggtcggtcgggtcgtttcggtcgcaagggt
gttgctatcaatttcgtgaagtccgatgacattcgaattttgcgtgacattgaacagtac
tattcgacgcaaattgacgagatgccgatgaatgtcgctgatttgatctaa
DBGET
integrated database retrieval system
