Bradysia coprophila: 119077021
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Entry
119077021 CDS
T08269
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03440
Homologous recombination
bcoo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119077021
03450 Non-homologous end-joining
119077021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcoo03032
]
119077021
03400 DNA repair and recombination proteins [BR:
bcoo03400
]
119077021
DNA replication proteins [BR:
bcoo03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
119077021
DNA repair and recombination proteins [BR:
bcoo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
119077021
BRCA1-C complex
119077021
NHEJ (non-homologous end-joining)
MRX complex
119077021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SMC_N
SbcC_Walker_B
AAA_29
AAA_15
AAA_16
ABC_tran
AAA_22
Zf_2nd_IFT121
Motif
Other DBs
NCBI-GeneID:
119077021
NCBI-ProteinID:
XP_037040031
LinkDB
All DBs
Position
Unknown
AA seq
1303 aa
AA seq
DB search
MAVLEKLSIRGVRSFGTDPEDEQKITFTSPLTLILGENGSGKTTIIECLKYALTGECPTG
TDKGKLFVHDPKIFSNRESLAKVKLQIRNGINDLYTVTRGMKSSEKNGKSKFETIDNSIV
IERAGRNAEDLSYRGVDVNTQMCLAMGVSQAVISNVLFCHQEESSWPLDTDKKLKEKFDA
IFGTTEYNKAIDKLIKHRKTYMERAKLKEVETKLTLRLKQETEGKMMDLKANETKLAKIE
EKLNEFLEEVKPIEERMKKIQQLEWEVSKIHEEKVKLTTKIEKCKELQVALSSKIKTKFD
GSFAMLDREIRSFKEKMNEKKENLATNDLDLDRVKQHIEDLRIKLSDLDKKRTTLLMQRQ
KEQDLLAEQFKLCTNLYNRLNIVVDFDSQGENMNMAECLSQIAQAIKKEETSVNDLSKDH
EKVDGDLQLEVDQLREKQASVKSDISSEKKQIEELKQEQQKGQDEIEKVEKSAESLKRVM
SELAKVSDCYDKLTQTTNLEEMKRNIDLKRKRRNELQTRLDAVDREIVFLTSISKTTAEI
SAKESQLDAKETESRKLRNKHSENLKRLFHNETVEANYERRVQTVYQNCQRDMDEATKNI
NRNQQKMTELQIMRKNQKEELSRLEKELTECDEKIYDECHGAPFPEVLERVKENVAKYQL
DHGAIKSSEALYKKYLSKLDGESCCPLCHKEMNGSEVNDLSTELSDEIRRLPESIKRTEL
TLKSEQKKLELLLSIRPMTIRSQTLKTDIPKMKEKLKETEERLSNAMSDAENLQISIAEP
KSNIELASIMLGDMSVLDKALKDITRFQQELNTLKASVPQGSTTMTMDEAQKKKAGISEE
NKKNNGEISALEEIHDSNSKMLNTLREKRNKLKDDQIKLQEDAHALPQMKGRQQEIFQQI
QKHSSDLRKIESSLEPINRQLTEIVDRKERIKNDNRKILIAVTKKLNDTKYIEADLKRCS
DDVQKLAELRLQPEIERLKISVKKYQDVQKEKSIEHADLTAKIEQLRKEISGQELIERNL
QDNKELKTLESEQHELQALLDEQLKNFGEMDFESIQREKKVLKEKDEIINRKRSECVGQK
NLLLSQKAALETELNKPDFKNAVKNHLQAIYEVTVLKKIISDLGQYRMALESALLKYHSE
KMNKINRLIRELWRSIYRGNDIDYVQIQTNEMKNSSADTKRSYDYRVVQSKNDVEIDMRG
RCSAGQRVLACLIIRIALAETFSANCGVLALDEPTTNLDQNNIVSLCEALNKIVEERQGE
SSFMLLIITHDEEFISTLGSISTYYKVARNSSGKSQIQKVKLS
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atggctgtattggaaaaattgtcgatccgtggtgttcgttcattcggaacagatcctgaa
gacgaacaaaaaattacgtttacctcgccactcacattgatacttggggagaacgggtcg
ggcaagacaacaataatcgagtgtttaaaatatgctttgaccggcgaatgtcctactggc
acggataaagggaaactgttcgttcatgatccgaaaatattcagtaatcgcgagagctta
gctaaagtgaaattacagataaggaacggcatcaatgacttgtacacggtgacgcgtggt
atgaagtcatcggaaaagaatggcaaatcgaaattcgaaacaatcgacaattccatcgtc
atcgagagagcaggcagaaatgcagaagacctgagttaccgtggtgtggatgtcaataca
caaatgtgtctcgctatgggtgtgtcacaagccgtgatcagcaatgtcctattttgtcac
caagaagagtctagctggccgctggatactgacaaaaagctgaaagagaaattcgatgca
atcttcggaacgaccgaatataacaaagccattgacaagctgatcaaacaccgaaaaaca
tacatggaacgggcgaaattaaaagaagtcgaaacaaagctgacgttgcggttgaagcag
gaaactgaaggtaaaatgatggatcttaaagcgaatgaaacgaagctggcaaaaattgaa
gagaagttgaacgaatttctggaggaagtaaagccgatcgaagagcgtatgaagaaaatt
caacagctcgaatgggaagtcagtaaaatccatgaggaaaaggtcaaactgaccaccaaa
atcgagaaatgcaaggaattacaggtggccttatcgtcaaaaatcaaaaccaaattcgat
ggatcttttgcgatgctcgatcgcgagatccgttcgttcaaggagaagatgaacgagaaa
aaggaaaatctggcaacgaacgacctggatttggatcgcgtcaagcagcacatcgaagac
ctacgaatcaaattgtctgacttggataaaaagcgaaccacattattgatgcaacgacag
aaagaacaagatctgttggccgaacaattcaaattgtgcaccaacttatacaatcgccta
aacatcgttgtcgatttcgattcgcagggcgaaaatatgaatatggctgagtgtctgagc
cagattgctcaagccattaaaaaggaagagacgagtgttaacgatttgtcgaaagatcat
gagaaagtcgatggtgatttgcagttggaagtggatcagctacgtgaaaaacaagcatcg
gtcaaaagtgacatttcgtcggaaaagaagcaaatcgaagaattgaagcaggagcaacag
aaaggccaggacgaaatcgaaaaagtcgaaaaatcagccgaatctttgaaacgagtgatg
agtgaattggcaaaggtctcggattgctacgataaattgactcaaaccaccaatttggag
gaaatgaaacggaatattgatctgaaacgtaaacgtcgcaatgagcttcaaacgcgactg
gatgccgttgaccgagaaattgttttcctaacttccatatcgaagacgactgccgaaatt
tcggcgaaagaatcgcaattggatgcaaaggaaacggaatcccgaaaattgcggaataaa
cattcggagaatttgaaacgattgttccacaacgaaacggttgaggcgaattacgagcgt
cgcgtccagactgtttaccaaaattgtcagcgtgacatggacgaagccacgaagaacatt
aatcggaatcagcaaaaaatgacggaactgcaaataatgcgaaagaaccagaaggaggaa
ctgtccagattggaaaaagagttgaccgaatgcgatgaaaaaatctacgatgaatgccac
ggagcgcctttccctgaagttcttgaacgagtcaaggagaatgtggcaaaatatcaactg
gaccatggagcgataaagtcatcagaagcgttgtacaagaagtacctcagcaaactcgat
ggcgaatcttgctgtccgttgtgccataaagaaatgaatggaagtgaggttaatgaccta
tcgaccgaacttagcgatgaaattcgccgtctacccgaaagcattaaacgcactgagctc
accttaaaatccgaacaaaagaaattggagctcctgttgtccattcgaccaatgaccatt
cggtcgcagactttaaaaacggatataccgaaaatgaaagaaaaattgaaggaaaccgag
gaacgtctttccaatgcgatgagtgatgctgaaaatttacaaatctccattgctgagccc
aaatcgaacattgaactggcgagcataatgctgggcgatatgagtgtgttggacaaggcg
ttgaaggacattactcggtttcaacaggaattgaatactctcaaggcaagcgttccccaa
ggatcgactacaatgacaatggatgaagctcagaagaaaaaagcaggaatttcagaggaa
aacaaaaagaataacggcgaaatcagcgccttagaagaaatacacgacagcaactcaaag
atgctgaacaccctgcgagagaagcggaacaaactgaaggatgaccagattaaactgcag
gaggatgcgcatgcattgccacaaatgaaagggcgtcaacaggaaatcttccaacaaatc
caaaaacattccagcgatcttcgtaagatcgaatccagtttggagccgatcaaccgtcag
ctgacggagattgtggatcgcaaggaacgtattaaaaacgacaaccggaaaatcttgatt
gctgtgacgaaaaagctaaacgacacgaagtatatcgaagctgatttgaaaaggtgctca
gatgacgtccagaaacttgcagagctgagactacagcctgaaattgaacgcctcaaaatt
tctgtgaagaaatatcaggatgttcaaaaggagaaatcgatcgaacacgctgatcttact
gcgaaaatcgagcagcttcgaaaggaaatttccggtcaagaattgatcgagcgaaattta
caggacaacaaggagctgaaaacgctcgaaagcgagcaacacgaactgcaagctctgctc
gacgaacaactgaagaattttggagaaatggatttcgaaagcattcagcgagaaaagaaa
gttctcaaggaaaaggacgaaatcataaatcggaagcgcagcgaatgcgtcggtcagaag
aatttattgttgagtcaaaaggctgcactggaaaccgagctgaataaacccgattttaag
aatgccgtgaaaaatcatcttcaagccatttacgaagtgacggtcttgaagaaaatcatt
tccgatttgggccagtatcgtatggcactggagtcagcgttactgaaataccattcagag
aaaatgaacaaaatcaatcgtctgattcgggaattgtggcgatcgatctacagaggaaat
gacattgactacgttcaaattcaaaccaacgaaatgaaaaattccagcgccgatacaaag
cgcagctacgattatcgggtcgttcaatcgaaaaatgatgtcgaaatcgatatgcgagga
cgatgcagtgctggtcaaagagtattagcttgtttaatcatccgtattgcattagctgaa
acattttcggccaattgtggagtactggcgttggacgaaccgactacaaatttggatcaa
aataatattgtgtcgctgtgcgaagcgttgaacaaaattgtggaagagcggcagggagag
agcagcttcatgttacttatcatcacccatgacgaggaattcatttcgactttgggaagc
atttcgacgtattacaaagtggcccgaaacagttccggaaaatcgcaaattcaaaaggtg
aaactgtcgtaa
DBGET
integrated database retrieval system
