KEGG   Bradysia coprophila: 119077106
Entry
119077106         CDS       T08269                                 
Name
(RefSeq) THO complex subunit 6
  KO
K13175  THO complex subunit 6
Organism
bcoo  Bradysia coprophila
Pathway
bcoo03013  Nucleocytoplasmic transport
bcoo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bcoo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119077106
  09122 Translation
   03013 Nucleocytoplasmic transport
    119077106
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcoo03019]
    119077106
   03041 Spliceosome [BR:bcoo03041]
    119077106
Messenger RNA biogenesis [BR:bcoo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     119077106
Spliceosome [BR:bcoo03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    119077106
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_IFT122_1st Beta-prop_WDR3_2nd WD40 Beta-prop_WDR3_1st WDR55 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_WDR36-Utp21_2nd Beta-prop_DCAF4 NBCH_WD40 Beta-prop_DCAF12 Beta-prop_NOL10_N Beta-prop_TEP1_2nd Beta-prop_ACSF4 WD40_Gbeta Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd DSE1_N Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_VPS8
Other DBs
NCBI-GeneID: 119077106
NCBI-ProteinID: XP_037040164
LinkDB
Position
III
AA seq 339 aa
MLPERLKIFYNTILCQTISSDGCYLFAGNNFGEIFVYNISHICAEPNESASQEIRQTSVR
PVQIFETAEKGSQIHSLAFHNNFVIVGTRNATVTGYSWIKNEISKKVWEVKLSSKSNKDS
VDSKWIEVNSFWLDKANSLLYAGCGDNQIYAIRLDCGVVEREFDGHTDYVLSVYGLATDH
RLFSGSEDGTVKFWDRRIEQSTDQIKPYENSKLQRPELGKWIGTVSATDDWIVCGGGAKF
SLWHLRSLECTTVYNYPGKAQVSGFLEDSVYVAGDSSKLHQFTLNGETTSEIPVSGPAVY
SVVYQNDPFKIMSIAGASKNLDICTNFNYKDIVLNLYDK
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgcttccggaaagattgaaaatattttacaacacgattttgtgtcagacaatatcatcg
gacggctgctatttatttgctggaaacaattttggtgaaattttcgtatacaacatttct
cacatatgcgctgagccaaatgaatccgcatcccaagaaattcgacagacctccgttcgt
cccgttcagattttcgaaacagctgaaaagggtagccaaatacacagtctggcattccac
aacaatttcgttattgtcggcactcgaaatgctaccgttactggctattcttggataaaa
aacgaaatttcaaagaaggtatgggaggtaaagctgtcgtccaaaagcaataaggattcg
gtggattccaagtggatcgaggtgaacagcttttggctggataaagcgaattcgctttta
tacgctggttgtggcgacaatcaaatctacgccattcgccttgactgtggcgtagttgaa
cgagaatttgacggtcacacagactacgttctatctgtatacggcttggcaacagatcat
cgactgttttccggttctgaagatggaaccgtcaaattttgggacagacgtatagaacag
tccaccgatcaaataaaaccatacgaaaacagcaaactacaacgtccggagttgggaaag
tggattggaacagtctcggcaacagacgattggattgtttgcggtgggggcgctaagttt
tcgctatggcatttgcgatcactggagtgtacaaccgtttataattatcctggcaaagcg
caagtatctggatttttggaagattcggtgtatgtggcaggtgattcaagcaaattgcac
caattcacactgaacggtgaaactaccagtgaaataccagtgtctggaccagccgtgtac
agtgtcgtttatcaaaacgatccgttcaaaataatgtccattgcaggagcgagcaaaaat
ttggacatctgcacgaacttcaattataaggacattgttctcaatttatacgacaaataa

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