Bradysia coprophila: 119077130
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Entry
119077130 CDS
T08269
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03013
Nucleocytoplasmic transport
bcoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119077130
09122 Translation
03013 Nucleocytoplasmic transport
119077130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcoo03019
]
119077130
03041 Spliceosome [BR:
bcoo03041
]
119077130
Messenger RNA biogenesis [BR:
bcoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
119077130
Spliceosome [BR:
bcoo03041
]
Complex C
Other components
EJC/TREX
119077130
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119077130
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
TMEM215
Motif
Other DBs
NCBI-GeneID:
119077130
NCBI-ProteinID:
XP_037040200
LinkDB
All DBs
Position
Unknown
AA seq
1405 aa
AA seq
DB search
MAEKKCEAIKLWERNGKSDFKKQLSTLVKSQSSPLFCGADKKNIFFRAIYDLLSLGCKGL
IKKDLVLSTLQEISLMHTDFPSIILDIIGILDAETSTGLNTDGAPDRGTFCQIIKEVEKF
LSEKLLKERLEIDTLQDVGTIKNKTFYTKFIKVKTKLYYKQRRFNLFREESEGYAKLITE
LNQDPTTNVSVDHLLKIITSLIGCFNLDPNRVLDIILESFETRPEQNKLFIGLLKAYMPN
GNIICEVLGYKYRHFSDSKTPSSLYVITALLLQSKIISLDDIYSWLSPTDKSIQIDWETD
LDDAKEYVRKLNVISINNNNKEPEAEVEKEENDDKYATNQKWNLCEALLHVGDWQTAQKL
IEKLPKYSVLVRENVALALCDLIHRVIDPVYVSKCSVTPSRKERIYTSNTNKLSTPQAKS
LFDLRVNAFPMAVQLGPSLFLDPVLLYKLVRLCRVILTDMSVDPSTSPKTPDDELLYFDI
MTLLDSSILPALSYMECNCCVAEEIWSVVKFLPYHIRYSLYGRWKNDTFLVHPKLIRRRG
AAQKKIKALMKRVSKENVKPVGRSIGKLSHCSPGFLFDYILIQIQIYDNLIGPVVDSLKY
LTSLSYDVLGYCLIEALAQADKNRFKHDGTSISMWLQSSANFCGSIYKKYNIELSGLLQY
VANQLKSHKSLDLLILKEVVQKMTGIEATEEMTLEQLNAMSGGELLRSEAGYFSQVRNTK
KSSLRLKEALASNDLAVTLCLLMAQQKHCVIYRETAHSHLKLVGKLYDQCQDTLVQFGTF
LGSTYSVDEYMERLPSIHSMLQEYHIHSDVAFFLARPMFTHQINQKYDQLRKADTSTKKL
STVQKQEKYLEATSAIISPIVESVRPLHPSKVWEDISPQFLVTFWSLSMYDLLVPVDSYQ
KEIQKIKEQSLSVLDSKDMNLSKGRKEQERYLALIDKLQDERKKQTDHVEKIMHRLNQEK
DSWFLSRSAKSAKNETITQFLQLCLFPRCTFTAMDAVYCAKFVHTIHTLKTANFSTLLCY
DRIFCDITYSVTSCTENEATRYGRFLCAMLETVMRWHKSSQTFNSECANFPGFVTKFRVS
NQFSEANDHVGYENYRHVCHKWHYKITKAMVFCLESKDYMQIRNALIILMRILPHFPMLV
KLAQIIERKVEKVREEEKNKRQDLFVLASSYIGQLKTRSADMVHESQFHQVADKPNKEVA
ETSKPSVNGNATEPKEPVVEKKIKPIAAPAEKEVKKERESNGKVQEPPVVVLDKKSSKEQ
KREEKQREKEEKEIETRKRDRDRSEKRRDRKTASPATNYYDLATNDRYYTTDQYEPTDRE
RDRDLSSISNSSNGSTNRRQESPDHDREVKRRKVDSSLKKSLDDGPIIFDDTKKERTTKS
KDKKEKSWDDGDVRKEKKVSRKREK
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaaaaatgtgaagctataaaattatgggaaagaaatggaaaaagtgatttc
aagaaacaattgtcgactttggtaaagagtcaaagctctccactgttttgtggagcagat
aagaagaacatatttttccgtgcgatctacgatctcctatcgttgggatgcaaaggacta
atcaaaaaagatttggtgctgtcgacactacaagagatatcgttgatgcacactgatttt
ccatcaattattttggacatcattggtatattggatgcggaaacgtcgactggactgaat
acagatggagcgccagatcgtggcacattctgccaaatcatcaaagaagtggagaaattt
ctatcggaaaaattgttgaaggaacggttggagatcgacactcttcaagacgttggaacc
atcaaaaacaaaacgttttacacgaaatttatcaaggtcaaaaccaaactatactacaaa
cagagaagattcaatttgttccgtgaagagagcgaaggctacgcaaaattgataaccgaa
ctcaatcaagatcccacaaccaatgtatcagtcgatcatttattgaaaattatcacatcg
ctgattggctgcttcaatttggacccgaatcgtgtgcttgacataattttggagtcattc
gaaacacgtcccgaacaaaacaaactgttcattggtttgctcaaagcgtacatgccgaat
ggtaacatcatttgcgaggtgctcggatacaaatatcgccacttctctgacagcaagaca
ccatcctcgttgtatgtcatcacggcactgctgctccagagtaaaattatttctttggac
gatatatactcatggttaagtccaactgacaaaagcatccaaattgactgggaaacagat
ttagatgatgcaaaggagtacgttcgcaagctgaacgttatttcgatcaacaacaacaat
aaagaaccggaagcggaagtggaaaaagaggaaaatgacgacaaatatgccaccaatcaa
aaatggaatttatgtgaggctctgctgcacgtcggagattggcaaactgcgcagaaattg
atcgaaaaattgccaaaatattccgttttggtacgcgaaaatgttgctctcgcgttgtgc
gatttgattcatcgcgtcatcgatcccgtttacgtatccaaatgttcggtaacaccgagt
cgaaaggaacgaatctacaccagcaacacaaacaaactgtcaacgccacaggcaaaatct
ttgttcgatttgcgtgtcaatgcgtttccaatggctgttcagctgggaccgtcgctgttc
ctcgatccggtgttattgtacaagctcgttcgactgtgtcgagtcattttaacggacatg
tcggtggatccatcaacatcaccaaaaacacccgacgacgagctattgtatttcgacatc
atgacccttctcgattcgtcaatactgcccgcactgtcgtatatggaatgtaactgttgc
gttgccgaggagatttggtcggtggtcaaatttctgccatatcacatcagatatagcttg
tacggccggtggaagaacgacacatttttggtgcatcctaagctaatacgacgacgtgga
gctgcacaaaagaaaatcaaagctctgatgaaaagagtgagcaaggagaatgtgaaacca
gtcggtcgatccatcggaaagctgagtcactgttctcccggatttttgtttgactacatt
ctcatccaaattcaaatttacgacaatttgattggaccggtcgtcgattcgctcaaatat
ttaacatcattgtcgtatgacgtattgggatattgtcttatcgaagcacttgcacaagct
gacaaaaatcgtttcaagcacgacggtacatcgatatcgatgtggttgcaaagttcggcg
aacttctgcggttccatctataaaaagtacaacatcgaactgagtggcttgctgcagtac
gtggcaaatcaattgaaatcacataaaagtttggatttgctgatactgaaggaagtagta
caaaaaatgactggaatcgaagctaccgaagagatgactttggaacagttgaatgctatg
tccggcggtgaattattacgcagcgaagccggatatttcagtcaagtgcgcaacacgaaa
aaatcgtcactacgtctcaaggaagcgcttgccagcaatgacttagccgtaacattgtgt
ctgctgatggcacagcagaaacactgtgtgatttatcgcgaaacagctcacagccacttg
aaattggtgggaaaactgtacgaccaatgtcaagatacgctggtgcagtttggtacattc
cttggctcaacatattcagtcgatgaatatatggagcgtttgccatcgattcacagcatg
ttgcaggagtatcacatacattcggacgtagcgttctttttggctcgaccaatgttcaca
catcagatcaatcaaaagtatgatcaacttcgtaaggctgacacaagtacaaagaaattg
tcaacggtacaaaagcaggaaaagtatttagaggcaacatcggcaataatatcaccgatc
gttgaatccgttcgtccattacatccatccaaagtatgggaagatattagcccacagttt
ttggtcacattctggtcgttgagtatgtacgatctccttgtcccggtggacagttaccag
aaagaaatacagaaaataaaggaacaatcgctgagcgttttggactcgaaagatatgaac
ttatccaaaggccgcaaggagcaggaacgttacctagcgttgatcgataagttacaggat
gaacggaaaaagcaaaccgatcacgttgagaagatcatgcatcggttgaatcaggaaaaa
gacagttggtttttgtccagatcggcaaagtctgccaagaatgagaccataacacagttc
ttgcagttgtgtctgtttcccagatgcacttttactgccatggatgctgtatactgcgca
aaatttgtgcatacgatacataccttgaaaacagccaatttctcgaccctcctgtgctat
gacagaatattttgcgatattacctattcagtcacatcatgtaccgagaacgaagcaact
cgttacggcagatttttgtgtgcaatgctggaaactgttatgagatggcacaaatcttcg
caaacattcaacagcgaatgtgcaaatttccctggcttcgtcacgaaattccgagtcagc
aatcagttttccgaagctaacgatcacgttggatatgaaaattaccgacacgtctgtcac
aaatggcattacaagataacgaaagcgatggttttctgcttagagtccaaggactacatg
caaattcggaacgcattgatcattcttatgcgcattttaccgcatttcccgatgctggtg
aagttggcacaaatcattgaacgcaaggtggaaaaggtgcgcgaagaagaaaagaacaaa
cgacaagatctattcgtcttagcatccagttacatcggacaattgaaaacgagatcggca
gacatggtacacgagtcgcagttccatcaagttgcagacaaaccaaataaagaggttgcg
gagacatcaaaaccatccgttaatggtaacgcgacggaacctaaagagccggttgtggag
aaaaagatcaaaccgatcgctgcgcccgccgaaaaggaagtcaaaaaagaaagagaaagc
aatggcaaagttcaggaaccgcctgtcgttgtgttggacaaaaaatcgtcgaaagagcag
aaacgcgaagaaaagcaacgagaaaaggaggaaaaagaaatcgagacgcgaaagagggac
agagatcgcagcgagaagcgtcgcgatagaaaaactgcttcacccgcaacaaactactat
gacttggcaacgaatgatcgttactacacgaccgatcaatatgaaccaaccgaccgtgaa
cgtgacagagatctaagttcgatttcaaattcaagcaacggttcaacgaatcgacgtcaa
gaatctcccgatcatgacagagaagtgaagcgtcgtaaagtggacagttcgttgaagaaa
tcactggacgatgggccgatcattttcgacgacacgaaaaaggagcggacaacaaaatcg
aaagacaaaaaggagaagtcttgggacgatggtgatgttcgtaaggagaaaaaggtcagc
cgcaaaagagaaaaatga
DBGET
integrated database retrieval system
