Bradysia coprophila: 119077685
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Entry
119077685 CDS
T08269
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119077685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcoo03019
]
119077685
Messenger RNA biogenesis [BR:
bcoo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119077685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
119077685
NCBI-ProteinID:
XP_037040841
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MADDPNEESWLYGSNPEPPEEQDSKDALAVQNDDAVDEDEKPELAEEPENAEASNAADEM
EEQEDGSIFKEENNENGEDSDDSDDDINVVIGDIKSGPSYSIKQRSGALAPGSTAPADKQ
KQAPGKFSIDEFESVGTIAGVQAHEFSIDSLEEKPWRKPGADITDYFNYGFNEDTWRAYC
ERQKQMRLNESGVGLQSLSANLNNSNSGSNRTVSGSNEGGGFGQGGFMRRSGGPPPFRKA
TGHIDVIGSNGLSSRRDGHNDVNKSIIPAKENVIQVMTAERREYSRVQGMPPPGFPMNEP
FFEADNYNYGYEPTQEQQWNQQEPGWVPSGIKELTPGHMVVPPPGMNVGMMRPPMSGPGQ
MVPPHHMMASQGQVMPPSHGNDRDRDRDRDRDRRGDRDRERDRDRGKSEESERGTRDRDR
YRERSTRRDARDTRDSRETRDRSRSRDRRRKSRSRDKDRKSRDKKKTHKKDKEKDDRDSD
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgatccgaacgaagaatcatggctctatggatctaatccagagccacccgaa
gagcaggacagtaaggatgcattagcagtacaaaatgacgatgcggtcgatgaagatgaa
aagcctgagttggctgaggagcctgaaaatgcggaagcatcgaatgctgccgatgaaatg
gaagaacaagaagacggttccatattcaaagaggagaacaacgaaaatggggaagattcg
gatgacagtgacgatgacatcaacgttgtgattggagatattaagtccggtccaagttat
agtataaaacaaagaagtggtgcactcgcaccgggctccacagcaccggcagataaacag
aaacaagctccgggaaaatttagcattgacgagttcgaatcggttggtacaattgcgggt
gtacaggcgcatgaatttagcattgattcgctcgaagaaaagccgtggcgaaaacctggt
gccgacataactgactatttcaattatggatttaatgaagatacgtggagagcctactgc
gaacgacaaaagcagatgcgtttgaatgaaagcggcgttggtctgcaaagtttgtcggcc
aatctgaacaactcaaattcaggttcgaatcgcacagtctcgggctcgaatgaaggcggg
ggatttggtcaaggtggttttatgcgacgatctggtggtccgcctccgttccgcaaagcg
acaggacacattgatgtgatcggaagtaacggtttgtctagtcgacgtgatggtcataat
gacgttaacaagagtatcattccagcgaaggagaatgtcattcaagttatgacagccgaa
cgccgtgaatacagtcgagtgcagggcatgccacctccaggttttccaatgaacgaaccc
tttttcgaagcagacaactacaattatggatatgaacccacgcaagagcagcaatggaat
cagcaagagcctggttgggttcctagtggcataaaggaattaacgccaggtcatatggtt
gttccgccgccagggatgaatgtcggaatgatgcgaccaccgatgagtggtccaggccaa
atggttccaccacatcatatgatggcatcacaaggtcaggtcatgccgccatcgcacggc
aacgacagagacagagatcgagacagggatcgtgatcgtcgtggtgacagagatagggaa
agagaccgtgaccgaggaaaatctgaggaaagtgaaaggggaacgcgtgatcgggatcgt
taccgcgaacggagtacaagacgtgatgcaagagatacacgagattccagagaaacgagg
gatagatctcgcagtcgggaccgccgccgaaagtctagaagtcgtgacaaagatcgtaag
agtcgcgacaagaaaaagacacacaaaaaagataaagaaaaggacgatcgggacagtgat
taa
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