Bradysia coprophila: 119078230
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Entry
119078230 CDS
T08269
Name
(RefSeq) uncharacterized protein LOC119078230
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119078230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bcoo03041
]
119078230
03009 Ribosome biogenesis [BR:
bcoo03009
]
119078230
Enzymes [BR:
bcoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119078230
Spliceosome [BR:
bcoo03041
]
Complex A
U1 snRNP components
U1 related factors
119078230
Complex B
119078230
Ribosome biogenesis [BR:
bcoo03009
]
Eukaryotic type
Pre-60S particles
Helicases
119078230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
119078230
NCBI-ProteinID:
XP_037041584
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MDKMNRRRNRRGAKRFMRPEKGKMKAKNTSLQNLRAPNWNNLNLEPFQKNFYREHPNVMN
RLRHDVERFRNKHEITVQGLALNPIESFDEVFMPDYVAREIRNQGYNRPTPIQSQTWPIA
FSGYNLVGIAQTGSGKTLAYILPAIVHINNQNNIKPGDGPIAVVLAPTRELAVQIQQVAI
DFGSSTHIRTVCTVGGVDKKPQEADLRKGCEIVVATPGRLLDFLSANVTNMKRCTYLVLD
EADRMLDMGFEAQIRQIISQIRPDKQILMWSATWPLEIRRLAEDFLGNYIQVNIGSLQLS
ANHNIKQFVHICQENEKSAKLQLLLRQIYQANNPGKILIFVSKKKRADMISKYINNFGVA
CESLHGDKPQSQRTKILDDFRSGRSNIIVATDVAARGLDVDGIMYVINLDFPKLIEDYVH
RIGRCGRCDRMGISYAFFTYNDAKQAKDLISILNEANQAVDAKLQEIAFNPIKPEKIDKK
QRRLNEISGFDVPAPEKRRHDGPDTNFSGPGPNKNFSGPGPSSKSTRDSYVGEPIVKRGR
IDEPGQSGMMLNRTTDRDLIEKPINRGYMNIPATVCNPDQMDDRSIGLRPFDSRNNARFE
TVDRLPATVCNPDQMDDRSIGLRPFDSRTNEIFKTVDRVTNRDLEDSRAIDRPSSADRRM
MELRRREFERSVVGVEQQFPSVGMNEYRILNGEGPSDRQRFKSTEFEREEPAMGLDRTRN
IRENVYDQRENVFGRQQSDFDRREDDFGRIEGHFGRRENEFGRRANDFGRQEDRFGRRET
DSGRRENDLGRRDFDRMNVMNDFLDRSNDRVLRDPFDDIQGPIQDGRDIEVSRMGPMLDS
SVSDRRIYEREMMGVRDAFSSRAANFQDNLQNRTFDMLSERRSVSQEYRRLSPNPILDRS
DVNADRFLNQSRDDDAYGSLNQFGNRRDDFRDSRDSGFGMSDRRNDFIDDLDRDEPTSNR
WNNDFTGRDAYSKGQDRRNFGNDLRRPNDFSLGGEMNFNFARNNDYVDDDFPNRNRRDFE
RRNFDDRFNRFS
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggacaagatgaatagacggcgaaatagacgaggtgctaaacgattcatgcgtcctgaa
aaaggcaaaatgaaggcaaagaatacttcgttgcaaaatctacgggcaccgaattggaat
aatttaaatctggaaccgttccaaaagaatttctaccgcgagcatcccaatgttatgaat
cggcttcggcacgacgttgaacgttttcgtaataaacacgaaataacggtgcaaggattg
gcattgaatcccatcgaatccttcgacgaagtttttatgccagactatgtcgcccgtgaa
attcgcaatcagggttacaaccgaccaactccaatacaatctcaaacctggcctattgca
ttcagtggctataatttggttggaatcgcacaaactggctccggcaaaaccctcgcatac
attcttccagccatcgtacatatcaataatcagaacaatattaagcctggtgatggacct
attgcagttgttttagcaccaactcgcgaattagctgttcaaattcagcaggtggccatt
gacttcggatcgtccactcacattcgaaccgtttgcacagtcggaggtgtcgataaaaaa
ccgcaggaagcagaccttcgaaagggatgtgaaattgtcgtggctactcctggacgactc
ttggatttcttgtcggccaacgtcacaaatatgaaacgttgcacgtatttagttctggac
gaagcggacagaatgttggacatgggcttcgaagcgcaaattcggcaaattatttcccag
attcgtcccgacaaacaaattttgatgtggtcggcgacttggccgcttgagatcagacgc
ttggccgaagatttcctgggcaattacattcaagttaacatcgggtcgttgcagttgtca
gccaatcacaatatcaagcaatttgtgcacatttgccaggaaaacgagaaatcggccaag
ttgcaattgttgctgcgtcaaatctaccaggcaaacaatcccggaaagattctaattttt
gtgtcgaagaagaaacgagccgacatgatctccaagtatatcaacaatttcggggtcgct
tgcgagagtttacatggcgataaaccgcagtcgcagagaactaagattttggacgatttt
cgctcgggacggtccaacattattgttgctacagatgtggcagcaagaggtcttgatgtc
gatggcatcatgtacgtcattaacttggactttccgaaattaattgaggactacgtacac
cgtatcggccgatgtggacgatgtgaccgtatgggcatttcgtatgcattcttcacgtat
aacgatgcgaaacaggccaaagatctaatatccattctcaatgaggcgaaccaggcggta
gatgccaaattgcaagaaattgcattcaatccgataaaacccgagaagattgacaagaag
caacgtcggttaaatgaaatttcgggcttcgatgtgccagcgccggagaagcgacgacat
gatggtcctgatacaaacttcagtggaccaggtcctaataaaaacttcagtggaccaggt
cctagcagcaaaagtacacgggactcttatgttggagaaccgatcgttaaaagaggcaga
atcgatgaacctggacaatctggtatgatgctcaatcgcacaaccgatcgagatttgatt
gaaaagcctatcaacagaggctacatgaacattcctgctactgtgtgtaatcccgatcaa
atggatgatcgcagcattggcttacgtccgttcgattcccggaacaatgcgagatttgaa
acggtagatcgtctccccgctacagtgtgcaatccagaccaaatggatgatcgcagcatt
ggcttacgtccgttcgattcccggacaaatgagatatttaaaacagtagatcgtgtcacg
aatagggatcttgaggacagccgagcgatagatcgcccttcgtcagctgatcgacgtatg
atggaacttagacgcagggagtttgaacgctctgtggtgggcgtggaacaacaatttcca
agtgttggcatgaatgaatatcgaatattgaatggggaaggaccaagcgatcgccaaaga
tttaaatcaaccgaatttgagagagaggaaccagcgatgggattggacagaacgagaaat
attcgtgaaaatgtgtacgatcaacgggaaaatgttttcggtcgacagcaaagcgatttc
gatcgtcgcgaagacgattttggtcgtatcgaaggccatttcggtcgtcgcgaaaatgaa
ttcggtcgtcgcgccaacgattttggtcgtcaggaggaccgtttcggccgtcgcgaaacc
gattcggggcgccgtgaaaacgatttgggtcgtcgagatttcgatcgtatgaacgtcatg
aatgatttcctcgatcgatccaacgacagggtactacgagatcctttcgatgatattcaa
ggacctattcaagatggtagagatatcgaagtcagccgaatgggaccgatgttggactca
tccgtgtctgatcgtcgtatttacgaacgagaaatgatgggcgtgcgtgatgccttttca
tcaagagctgcaaactttcaagacaacttgcaaaatcgtacatttgacatgttatccgaa
cgaagaagcgtttctcaggaatatcgacgtctttcaccaaatcctatactcgatcgttct
gacgtcaatgcagacagatttctgaaccagtcacgtgatgacgatgcatacggttcattg
aatcagtttggcaatcgacgtgatgattttcgtgattcgcgtgattctggcttcggcatg
agtgacagacgcaacgatttcatcgacgatctcgatcgagacgaaccgacatcaaataga
tggaataacgattttactggaagagatgcatactcgaagggacaggatcggcgaaatttt
ggcaacgatttgcgtcgtccaaatgatttcagtcttggcggcgaaatgaatttcaatttt
gccagaaacaatgactacgtggatgacgattttcccaatcggaatcgtcgtgatttcgaa
cggcgaaactttgatgaccgtttcaaccgctttagctaa
DBGET
integrated database retrieval system
