Bradysia coprophila: 119078608
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Entry
119078608 CDS
T08269
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
bcoo
Bradysia coprophila
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcoo03021
]
119078608
03036 Chromosome and associated proteins [BR:
bcoo03036
]
119078608
Transcription machinery [BR:
bcoo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
119078608
Chromosome and associated proteins [BR:
bcoo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
119078608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
S1
Tex_central_region
HHH_9
Spt6_S1
SH2
Tex_YqgF
HHH_3
OB_RRP5_4th
S1_RRP5
Tex_N
HTH_10
DUF2924
Motif
Other DBs
NCBI-GeneID:
119078608
NCBI-ProteinID:
XP_037042097
LinkDB
All DBs
Position
Unknown
AA seq
1851 aa
AA seq
DB search
MSHFIDSEAESDNSDNEDLDPQERRKLKKLKAMSDSEEDDEDDEDRLREELKDLIDDAPI
EEGSDADDSDGSGNEKRKKSDDEDELDDRLEDDDYDLIEENLGVKVQRTKRFKRLKRMQI
EDSDGEDAADDGMDREAIANQLFEGDDDDNQEDSRRSVDNQRGNDLDHYDDEEDDEESDA
DDFIVDDEGRPITEKKKKVRRIFNDAHLQEGQDIFGVDFDYDEFDKYDEPDYEDESEAED
EYEEDGADGVEREKRPKKAVKKKTARKSIFEIYEPSELKRGHFTDLDNEIRKTDIPERMQ
LREVPIIPVPEGTNELDDEAEWIYKQAFLKPSVSTQDTATDGRDRTRKPSSTIGKIKQAL
DFMRNQQLEVPFIAFYRKEYVQPELNMNDLWQVYNYDAKWCQLLARRRTLITLFDKMRNY
QLEKIMSNADKELPEDIRLMKEEDIDRLKYVQTQEELKDIHTHFLLHYSHEIAAMNEAYK
VREKVRRRAERIAERAKLLENLEEGAEPPEEIPDDDDDDEPVEESLKLARDSGPYAMCRK
AGILGIAKRFGLTPEQFAENLRDNYQRHEVEQESIELSELAKEYINTKFTTVEDVLHAAK
FVVARQIAREPLLRKSVRETFYERAKLSVAPTKKGQKEIDENHCCYPMKYLKNKPVRELV
DEQFLRLAMAEEDKLLTISISEVIEGNTSNSYLDEAKSLYQRDEFSKNVQEWNTLRANCV
EEALNKMVLPDMRKELKSILISEAKESVLKKCCRKLHNWIKTAPYTVDFTEEDDFEWDSS
KGIRAMGLAYVPDHTQAAFCAVTNADGEFTDFLRVPHILKRKSSYHSDEKILKEADLLAM
KNFIRAKKPHVIVIGGESREAQMIQQDMQEICRELCDDDQFPSIQVHIIDNELAKIYSQS
KKGIADFRDYPTLLRQAVSLARKIQDPLIEYSQLCTADEEILCLRYHTLQDQIPKEQLLE
NLYLEFINRTNEVGIDVNSAVQNSLTVNLVQFVCGLGPRKGQALVKILKQTNQRLENRTQ
LVTACHMGPRVFINCSGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEY
DDEDANPAGALEEILESPERLKDLDLDAFAVELERQGFGNKSITLYDIRAELNSRYKDLR
APFRPLTPEELFDVLTKETPETFYVGKMILATVGGFSHRKPQGEQLDSANPVRNEETNLW
QCPFCLSNEFPELSDVWTHFDAKACPGQATGVRLRLDNGVSGFIHIKNLSDKHVKNPEER
VQVGQMIHVRITKIDVERFQADCSSKTSDLNDRNHEWRPQKDSYYDQDLEDMEMKKEDDS
KKKQSRQQYTKRIIVHPSFFNISYGEALKIIDKVETIVRPSSKGSDHLTVTWKIAEGIHQ
HIDVREKGKENAFSLGQSLWIGNEEFEDIDEIITRHINPMQAFARDLLAYKYYRDSAGGM
RDKMEELLKEEKKKNANKIHYFLSASKSYPGKFLLSYLPRGKIRHEYVTVTPEGYRFRQQ
IFESVNSLLKWFKEHFKDPLPGGTPMNTPKGSSTVSSRNSYATPALSNSSLGADAIHKVA
QNMPAHMMQSLSQATSHTPHYPHTPGYGQNINTPYTPSGQTPFMTPYHTPHHSPHMTPMH
ATPYSTPHHTPHQTHTPRYGQATPSKNSPFLQPGPPMGSRSHGSQQQSQPSPYYRASPRM
MNNSPHDMRFKHDNGSYQNNTRYNDRQDNRGDFRGRGRGGRGGVGGRGGGGGGRRGDDRN
ARHDDMFDSPRGSYQSKPKPVADDEEEDWDSPPQQQTPAKSSSYKAPHIQPSQPSRSQPS
RPQPTRSQPVAVADDEEDWDADEDTWQQPQQAKRAGNVSGTPPDTPLYDEN
NT seq
5556 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatttcatcgattccgaggctgagagtgataactccgacaatgaggacttggat
ccacaagaacggagaaaactgaaaaaattgaaggccatgtccgatagcgaagaggatgac
gaagacgatgaggatcggttacgcgaagagctgaaagatttgattgatgatgcacccatc
gaagaaggcagcgacgcggacgattcagatggatcgggaaatgagaagcggaaaaaaagc
gacgacgaagatgaattggatgacaggctggaggatgacgattacgatttgatcgaagag
aatctgggtgttaaagtccaacgaaccaaacgcttcaagcgcttgaaacggatgcaaatt
gaggacagtgatggtgaagatgctgctgatgatggaatggaccgtgaagctatcgccaat
cagttgttcgaaggtgatgatgacgataaccaggaagacagtcgacgatccgttgacaat
caacgcggcaacgacctcgaccattacgatgacgaagaggacgatgaagagtcggatgct
gatgattttattgttgatgatgaaggacgtcccataaccgagaaaaagaagaaagtgcgt
cggatattcaacgatgcccatttgcaggaagggcaggacatttttggcgttgatttcgat
tacgatgagtttgacaagtacgacgaaccggattatgaagatgagtctgaggctgaagac
gagtacgaggaagatggtgccgatggtgtggaacgagaaaaaagaccaaagaaagcagtc
aagaagaaaacggcacgaaagtcgattttcgaaatctacgaacccagcgaactgaaacgt
ggccacttcaccgatctcgacaatgagattcgtaaaacggacattcctgaacgtatgcaa
ctccgtgaagttccgataattcctgtgccagaaggcaccaatgaattggacgacgaagcg
gaatggatttacaagcaagccttcctcaaaccgtcggtttcgacacaagacaccgccacc
gatggacgtgatcgaaccagaaagccatccagcaccattggcaaaataaagcaagcgctg
gacttcatgcgaaatcaacaactagaagttcccttcatcgcattctaccggaaggagtat
gtgcaaccggaattgaacatgaacgatctgtggcaggtctacaactacgatgcgaaatgg
tgtcaactgttggctcgtcgtcgcactctcatcacgctgttcgataagatgcgaaattat
caactggaaaaaattatgtccaacgccgacaaggagctgcccgaagacattcggttgatg
aaagaagaggacatcgatcgactcaaatatgtacaaacgcaagaagaactgaaagacatt
cacacgcacttcttgctgcactattcccacgaaatagctgccatgaacgaggcgtataaa
gtcagggaaaaggtgcgtcgtcgagcggaacgcatagcggaacgtgcaaaattgttggaa
aatttagaagaaggtgctgagccacccgaagaaatacccgatgacgatgatgacgatgaa
ccggtcgaagagagtctgaaattagctagagattccggtccatatgctatgtgtcgcaag
gctggcatactgggaatagcaaaacgcttcggtttgacaccggaacaattcgctgaaaat
ttacgtgacaattatcagcgacacgaagtcgaacaggaaagcatcgaattgtccgaattg
gccaaagaatacatcaacaccaaattcacaaccgtcgaggatgttttgcatgcggcgaaa
ttcgttgtagcccgtcagatagctcgcgaaccgttgttaaggaagagcgttcgcgaaacg
ttttacgaacgagccaaactgtcggtggcacccacaaagaaaggacagaaagaaatcgac
gaaaatcactgctgctaccccatgaaatatctgaagaacaagcccgttcgtgaattggtc
gacgaacaatttttgcgactcgcaatggccgaagaagacaaactgctgacaatttccata
tccgaggtgatcgagggcaatacaagcaattcgtatttggacgaagctaagtcattgtat
cagcgcgacgagttctcgaaaaatgtccaggaatggaacacattgcgagcgaattgcgtg
gaggaagcactgaataagatggtgttaccggacatgcgaaaagaactgaaatccatactg
atcagcgaggccaaggagtccgtactgaagaaatgctgtcgaaaactacacaattggatc
aaaactgccccgtacaccgttgatttcaccgaagaggatgactttgagtgggactccagc
aaaggtattcgtgccatgggcttggcatacgtacccgatcacacgcaagcggcattttgt
gccgtcaccaatgctgatggtgagtttacggactttcttcgggtgccgcacattttgaag
cggaaatcgtcctaccattccgatgaaaagatactgaaggaggctgatctgttggccatg
aagaatttcattcgagctaagaagccccacgttatagtaattggtggtgagtcgcgcgaa
gcacagatgatccagcaagacatgcaggagatttgccgtgagttgtgtgacgacgaccag
ttcccatcgatccaagttcacatcatcgacaatgaactcgccaaaatctactcgcaatcg
aaaaaaggcatcgccgacttccgtgactatccaacgctgttgcgtcaagccgtatcattg
gcccgtaaaattcaagatccgctcatcgagtactcccaactgtgtacagccgatgaggaa
attttgtgtctgcgctatcacacgctgcaagaccaaatacccaaagagcaattgctagaa
aatctctacctcgaattcatcaatcgaacgaacgaggtgggcatcgatgtcaattcggcc
gtacaaaattcgctgaccgtcaatttggtgcaattcgtgtgtggcttgggtccgcgaaag
ggtcaagctctggtcaaaattttgaagcaaaccaatcagagactggaaaatcgtacccaa
ttggtgacggcttgccatatgggccccagagtgttcatcaattgttcaggtttcataaaa
atcgacacgaattcgttgggcgacagtacggaagcatatgtcgaagtgttggacggttct
cgcgttcatccggaaacgtatgaatgggcccggaaaatggctgtcgatgctttggaatat
gacgacgaagatgcaaatccggctggtgcattagaagaaattttggaatcgcccgaaagg
ctgaaagatttggatttggatgcgtttgctgtggaattagagcggcagggcttcggaaac
aagagcatcacattgtacgacatacgtgctgagctgaactcgcgttacaaggatcttcgt
gcaccatttagaccgttgacccccgaagaactgttcgatgtactgacaaaagagacgccg
gagacattttacgttggcaaaatgatcttagccacagtaggtggctttagtcatcgtaaa
ccgcaaggtgaacaactggattcggcaaatcccgtacggaatgaggagacgaatttgtgg
caatgtccgttctgtttgagcaacgaatttcccgaactatccgacgtgtggacccatttc
gatgctaaagcttgtcctggacaagcaaccggtgttagacttcggctcgacaatggtgtc
agtggattcattcacataaagaacttgtcggataagcatgtgaaaaatccagaggaacgc
gttcaagtgggacagatgatccatgtccgaattacgaaaatcgatgtggaacgtttccag
gctgattgctcgtcgaagacttccgatttgaacgaccgtaatcatgaatggcggccacag
aaggacagctactacgatcaggacttggaagatatggaaatgaagaaggaggacgattcg
aagaagaagcagtccagacagcagtacacaaaacgaatcatcgttcatcccagtttcttc
aacatatcgtacggtgaggcgttgaagatcattgacaaagtcgaaacaatagtacggccg
tcaagcaaaggctccgatcatctgacagtcacatggaaaatagctgagggcattcatcaa
cacatcgatgttcgcgaaaagggcaaggagaacgctttcagtctgggccagagtttgtgg
attggcaatgaagagttcgaagacatcgatgaaattatcacacgacacattaatccaatg
caggcattcgcacgcgatctattggcttacaaatattaccgagactcagccggtggtatg
cgagacaaaatggaagaattgctcaaggaagagaagaagaaaaatgcgaacaaaatccac
tacttcctgtcagcatcgaaaagctatccgggcaaatttctcctgtcatatttacctcga
ggtaagattcgtcacgaatatgtaaccgtaacgccggagggatatcgttttcgacagcaa
atattcgagtcggttaattcgctactaaaatggttcaaagaacactttaaggatccattg
ccggggggcacaccaatgaatacaccgaagggatcgtcaacagttagctctagaaattcc
tatgccacaccggcattgagcaatagtagtctcggtgcggatgctattcacaaagtagct
caaaatatgccagcgcacatgatgcaatcgttgtcacaagcaaccagtcatactccacat
tatccacacactcccggttacggccaaaatatcaacactccttatacgcccagtggacaa
actccatttatgacgccataccacactccccatcactcgccacacatgacaccgatgcat
gcgacaccgtacagtacaccacatcatacgccgcatcagactcacacgccaagatacgga
caggcaacaccatccaaaaacagtccattcttacagcctggaccaccgatgggctctcga
tcgcacggatcacaacaacaatcgcaaccgtcaccgtattaccgtgcatcgccgcgaatg
atgaataacagtccgcatgacatgagattcaagcacgacaacggctcctatcaaaacaac
actcgctacaacgatagacaggataatcgtggcgactttcgcggtcgaggtcgtggtggt
cgtggaggtgttggtggtcgcggcggcggaggaggtggtcgtcgtggagacgatcgtaat
gcacgtcatgatgacatgtttgattcaccgcgtggttcgtatcagagcaaacctaaaccg
gtcgctgatgatgaagaagaggattgggattcacctccgcaacaacagacaccggccaag
tcatcgtcatacaaagcgccccatatacagccatctcaaccgtctcggtcacaaccatct
cgaccacaaccgacacgatcacaacccgttgctgtagcggacgacgaagaggattgggat
gcagacgaggacacttggcagcagccacagcaagcgaaacgagcgggcaacgtcagtggt
acaccaccggatactccgctctatgacgagaattga
DBGET
integrated database retrieval system
