Bradysia coprophila: 119078810
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Entry
119078810 CDS
T08269
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119078810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcoo03019
]
119078810
03012 Translation factors [BR:
bcoo03012
]
119078810
Enzymes [BR:
bcoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119078810
Messenger RNA biogenesis [BR:
bcoo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
119078810
Translation factors [BR:
bcoo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
119078810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
OB_NTP_bind
HA2_C
AAA_19
HA2_N
ResIII
AAA_22
nSTAND3
ATPase
Swi5
AAA_11
NPHP3_N
AAA_24
Rad17
SRP54
PhoH
Motif
Other DBs
NCBI-GeneID:
119078810
NCBI-ProteinID:
XP_037042409
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MSKSFKYRQVASRLRNELQNRKSASSSNAAENVADDVRPPGLRGREIGLWYAKRNKMLKE
HELKGERQHDMLSGPKISLPEKVVDRMKKEIDDVQADIAKDSSSQTVQTDFSRYRETDFM
KLIQTDEEPQSSQQSSDLDTRLCEEFNVTTKTEKYEEMFQFRQRLPSFQHKDEIVDAVKR
NQVLLVAGNTGCGKTTQVAQYILDDALMNMEGSKTKILCTQPRRIAATSIAERVASERGE
ELGHSIGYQIRLEKTPPRSIASILFCTTGVLLKFMEQSPNLSEYSHIIIDEIHERNAITD
VCLALIKKITEHRKSLKVILMSATLNEERFAEYFNDCPIIRIAGLTYPVQDFFLEDILEE
TGFDNFTKRRKEPVWWKYKKPVQEATPIIQSYANSLRQKYSQKTIDLLKRPETENIDLAF
IQHIIMHISNTKPSGAILVFLPGFSVISKLYDNLQKDFPPSSYRIYPLHSLLTGSDQREI
FNKPPEGVRKIIISTPLAETSITIEDVVYVVNAGKMRRPYFDFERNAKVFEDEWITQANE
IQRKGRAGRTQPGICYHLYTRARSRHLKPFEKPEILRVRLEENILTLKVLCIQNVKWFAS
TMIDVPKESVIESSISCLQRLGALTENEELTPLGLHLANLGVHPKIGKMLLLGSIFSCFG
PISSISAGLSFKSPFFTLMGKEKLCDEAKRKFSSDSDQLAVANAMAEWKMSSRNRKDFCY
TNFLSNSTMGMLDRMRSQFAQLLHHSRFLSNAQCDSQENNRNSENVDLLKAVIAGGVYPN
IAHRVVKIRSRKDCIRTVERKGLRLLPSSVNNDPKAHYDPGFIVFDEMNKYTTNYFLTET
TSNVSPFGIILFGDKINVGVKDNINFISVGDMIEFRCDRSTADMIVALRDEFNCLLNKKI
LESSSILWDSSEGKLLQIIMDLISTHNSYENHEFDETSDNDDTTGDCTEKT
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatcattcaagtacagacaagttgctagtcgtctacgcaatgagttacaaaac
cgaaaatcggcaagttcatcgaatgcggccgaaaatgtggcagacgatgttcgtcctcct
ggcctaagaggacgtgagattggactgtggtatgctaagcggaacaaaatgctaaaggaa
catgagcttaaaggcgaacgacagcacgacatgctttcagggccgaaaatctcgctaccg
gaaaaggtagtcgatcgaatgaaaaaggaaatcgacgacgttcaggcagacattgcaaag
gattcgagctctcaaaccgttcagacagacttctcccgttatagagaaaccgatttcatg
aaacttattcaaactgatgaagagccacagtcttctcagcaatcatcggatttggatacg
cgactgtgcgaggagttcaatgttaccaccaaaacggagaaatatgaggaaatgtttcaa
tttcgtcagagactgccttcgtttcaacacaaggacgaaatcgtcgatgcagttaaacgg
aatcaagttctgctggttgccggcaatactggctgtggtaagaccacacaagtcgctcaa
tacatattagacgacgcactcatgaacatggaagggagtaaaactaaaattctctgcact
caaccgagacgaatagctgctacatcgattgctgaacgagtagcgtccgaaagaggcgaa
gaattgggccattcaatcggctatcaaattcgtttggagaaaacgccaccaagatcgatc
gctagtatcctattctgcacaactggcgttctactcaaatttatggaacagtcgcccaat
ttaagcgaatacagtcacataatcatcgacgagatacatgaacggaatgccattaccgac
gtatgtcttgcgctgatcaagaaaattaccgaacatcgcaagagtctgaaagttattcta
atgtcggcaacgttgaatgaagagagattcgctgaatatttcaatgactgtcccataatt
cgcattgccggcctgacgtatccggttcaggatttttttctggaagacatactggaagag
acgggcttcgataatttcaccaaacgtagaaaggagccggtgtggtggaaatataaaaag
ccagtccaagaagccactccgattattcaaagttatgcgaattcgctgcggcaaaaatac
tcacagaaaaccatcgaccttttaaaacggccagagaccgaaaacattgatttggcattc
atccagcacatcatcatgcacatttccaatacgaaacccagcggagccattctcgtcttt
ctacccggtttctctgtgatctccaagctttacgacaatctccagaaagattttccacct
tcatcgtaccgcatttacccgttgcattcgttgctaacgggaagcgatcaacgtgagatc
ttcaataaaccaccggaaggagtacgaaaaattatcatatcgactccgctggcagagacc
agcataacaatcgaagacgttgtttatgtcgtcaatgctggcaaaatgcgacgaccctat
ttcgatttcgagaggaatgcgaaggtgttcgaggatgaatggatcacacaggctaatgaa
atccagcgtaaaggccgagctggacgaacccagccaggcatatgctatcatttatatacc
cgtgcgaggtcaaggcatttgaaaccattcgaaaagccggaaattcttcgggttcgactg
gaggaaaatattcttacgttaaaagtgttgtgcattcaaaacgttaaatggttcgcgtcg
acaatgattgatgtaccgaaagagtcagtgatagaatccagtatcagctgccttcaaaga
cttggcgcactgaccgaaaatgaggaattgactccactcggattgcatttggccaatcta
ggcgttcatccgaaaattggcaaaatgctgttactcggatcgattttcagttgtttcggc
cctatttcaagtatatccgcgggactgtcgttcaagtctccgtttttcactctcatgggc
aaggaaaagttgtgcgacgaagctaaacggaaattttcatcagattcagatcaattggct
gtggcgaatgcaatggcggagtggaagatgagttctagaaaccgtaaagacttttgttac
actaactttttgtcgaattcgaccatgggtatgttagatcgaatgaggtcacaatttgcc
cagctacttcatcattcccggttcctaagcaacgcccagtgtgacagtcaagaaaacaat
cgcaactcggaaaatgtggacttgctcaaggctgttattgccggcggggtttatccgaac
atagctcatcgtgttgtgaaaatcagaagccgaaaagattgtatcaggacagtggaacgg
aaaggattgagactactgccatcatcagtgaacaatgacccaaaggcacactatgacccg
ggattcatcgtattcgatgaaatgaacaagtacacaacaaattactttttaaccgaaaca
acgtcgaacgtcagtccattcggtattatattgttcggcgataagatcaacgttggagta
aaggacaatatcaacttcatttccgtcggcgatatgattgagtttcgatgcgaccgatcg
acagctgacatgattgtagcactgcgcgatgaattcaattgtttgctgaacaaaaaaatt
ctggaatcgtcgtcgattttgtgggattccagcgaaggaaaattgttgcaaatcatcatg
gatctcatttcgacacacaattcatatgaaaatcacgagtttgatgaaactagcgacaat
gacgatactacgggtgattgtacagaaaagacttag
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integrated database retrieval system
