Bradysia coprophila: 119078995
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Entry
119078995 CDS
T08269
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03022
Basal transcription factors
bcoo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119078995
09124 Replication and repair
03420 Nucleotide excision repair
119078995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcoo03021
]
119078995
03400 DNA repair and recombination proteins [BR:
bcoo03400
]
119078995
Transcription machinery [BR:
bcoo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119078995
DNA repair and recombination proteins [BR:
bcoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119078995
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
vWA_LIC10012
Motif
Other DBs
NCBI-GeneID:
119078995
NCBI-ProteinID:
XP_037042655
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MADDDDGKEYRWETGYEKTWEAIKEDEDGMVEGAIADIIQKAKRKRQAQKKGHSRLGMMR
HFYIIVDCSESMSMPDLKPTRIMCTTKLLDKFIEEFFDQNPISQLGVIVMKSKRAEKLSE
MAGSSRKHIKALAQMNKMQLTGEPSLQNGLELALQTLKMIPSHASREILIIMGSLTTCDP
GDINTTIETLKKEGVRCSVVSLSAEIRICRHLATETGGLYSAVLDDTHYRDQLLQHIDPP
PAAQTQENSLIKMGFPHSHCEEAKEPALTMCMCHIDNVDEPSKLTAGGYQCPQCSSKYCE
LPVSCVSCNLTLVSAPHLARSYHHLFPVNPFREIPFTKQRDLCYACQKTFNDLDKNVYQC
DLCSQVFCIDCDIFIHDTLHICVGCTTIPMAAQSVHMREPVYKANAHYAN
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgacgatgatggaaaagaatacagatgggagaccggctatgaaaagacatgg
gaagcaatcaaagaagacgaagatgggatggtggagggagcaatagctgacataatacag
aaagcgaagcgcaaacggcaagcccagaagaagggacacagtcgtctaggtatgatgaga
catttctacattattgtcgactgttcggaatcaatgtctatgccggatcttaagcccact
cgtattatgtgtaccacaaagctgctcgataagttcattgaagagtttttcgaccagaat
cccatcagtcaattgggcgtgattgtaatgaaaagcaaacgagctgaaaaactatcggaa
atggccggcagttcgaggaagcacatcaaggcattggctcaaatgaataagatgcagttg
actggtgaaccatcactccagaacggtctcgagttggcattgcaaacgctaaagatgata
ccatcgcacgccagccgcgaaattctaatcatcatgggaagtctaacaacgtgcgatccg
ggcgatatcaacacgacaattgaaacactcaaaaaggaaggggtgcgatgttcggttgta
agtctgtccgcagaaatacgaatctgtcgccatctcgccactgaaacgggtggactgtac
agtgctgtgctggacgacacacattatcgcgatcaactgttacagcatatcgatccaccg
ccggcggcccaaacacaagaaaattcattgatcaaaatgggatttccacatagtcattgt
gaagaggccaaggagccagctctgacgatgtgcatgtgtcacattgacaacgttgatgaa
cccagtaaattaacggccggtggatatcagtgcccccaatgtagcagcaaatactgtgag
ctgcccgtgtcatgcgtatcctgtaatttaacactagtgtcagcaccacatttggctcgg
tcctatcatcacttatttcccgtgaacccgttccgcgagattccgtttaccaagcaacgt
gatctgtgctacgcatgccagaaaaccttcaacgatctggacaaaaatgtgtaccaatgc
gatctgtgctcgcaggtgttttgcatcgattgtgatattttcatccatgacacattgcac
atttgtgtgggatgtacaacgattccgatggctgcacaaagtgtccacatgagagagccc
gtctacaaagcgaacgctcattatgcgaattga
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