Bradysia coprophila: 119079035
Help
Entry
119079035 CDS
T08269
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03013
Nucleocytoplasmic transport
bcoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119079035
09122 Translation
03013 Nucleocytoplasmic transport
119079035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcoo03019
]
119079035
03041 Spliceosome [BR:
bcoo03041
]
119079035
Messenger RNA biogenesis [BR:
bcoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
119079035
Spliceosome [BR:
bcoo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119079035
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
119079035
NCBI-ProteinID:
XP_037042717
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MVNTKSKEKEKESERDSNDKKRRKSDSTVTKIPKEDVYASVVQFEEQESQHRPAEKDAEL
FHSTCSELRKLFEEINKLKKLKTEKARLEINEKRIEASFLFVLLKKLNRLDKVRLRTGRD
DLHNEKQIVDSNRLQLQNLFYESEHLNKEVQRCYQFKSEDEEIDLISEEEFYAQAPENIA
QSGKTSNDEHARRLARLSWELQQRKELAAMCKELEKQKELVAQDNETKTNLRDSLKPRLE
ALLKSTKPLQEALNMNFEEDWKVQKIASLLPRPLYLVYANLCAYSEACDNQLSVTINGDE
IDAKNLEEIDKFNSKIDLDDVPDSDNDDNDGENDRPSKGHHHRRKNKDVLLEQKKDNLFK
VHPLSVSLRIKSKINDTVLCVTLYYLPTLNFVTSLCKLEPENAAGVSEVLNPASILNALS
PGDYGEESVNPKTYYQLKEQSIDDFMVILREKMLGKPYRWAQDLCGLEFLNTASTSTTNY
SSISNEFVQLSVPKIVKQIRSRWQARLMLNSQISALENKSFTSTSLNQKAARISSSLLQW
TAITWEEYCSSLSTKRFVDANVITSHDLLYRAVITRGSAKLECFVGINANYPTEMPLSAL
ELSWNGRHNADSSAAIRDLEAWVNLIDDPKNTSNVLELQIHRALSSLDIYLETEGTLINS
SEFQATKTFLKAFRDRTHSRPYKMMENSGSVVYTQI
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggtaaacactaaatcgaaggaaaaggagaaagagtccgagagagattccaatgacaag
aaacgcagaaagagtgattccacggtcactaaaatacccaaagaagatgtgtacgcgtcg
gtagtgcaattcgaagagcaagaatcacaacacagacctgctgaaaaggacgctgagttg
ttccattcaacttgttcggaactacgtaaattattcgaagaaatcaacaaattgaagaaa
ctgaaaactgagaaggcacgcctggaaatcaacgaaaaacggatcgaagcctcgttccta
ttcgtgttgctgaagaaactgaaccgtttggacaaagtacgtttgcgtaccggccgtgac
gacctgcacaacgagaaacaaatcgtcgacagcaatcgcttgcagctgcaaaaccttttc
tatgaatccgaacatttgaacaaggaggtgcaacgctgttaccagttcaaaagcgaggac
gaagaaattgatttgatatccgaagaggaattctatgctcaggcaccggaaaatattgca
caatcgggtaagacatcgaacgatgagcacgctcgtcgattggctagactgtcatgggaa
ttacagcagcgtaaagaattggctgcgatgtgcaaggaactggaaaagcagaaagaactg
gtggcgcaggacaatgaaacgaaaacgaatttacgggacagcctgaaaccgcgcttggag
gcactgttaaagtcgacgaaaccgctgcaagaagctctgaacatgaactttgaggaagat
tggaaagtgcagaaaattgcaagtttactgccacggccactatacttggtgtatgcgaat
ctgtgtgcctattcagaagcatgtgacaaccagctttcggttactatcaacggcgacgaa
attgatgcgaaaaatcttgaagaaattgacaaattcaacagcaagatcgatttggacgat
gtgcccgattcagataacgacgacaatgatggagagaatgatcgaccatcgaaaggccat
catcatcgacgcaaaaacaaggatgttttgttggaacagaagaaagacaatctcttcaaa
gtgcatccgttgagtgtgtcactgcgaataaaatccaaaatcaacgacacggtcctgtgc
gttacgttgtactatctaccgactttgaattttgtcacatctctatgcaaactggagcca
gagaatgcggccggagtaagcgaagtactcaatccggcaagcatcttaaatgcattgagc
ccgggcgactatggagaagaaagtgtcaatccaaagacgtactaccagttgaaggagcag
tcaatcgatgattttatggtcattttgagggaaaaaatgttgggcaaaccgtaccgatgg
gcgcaggatctatgcggtttggagtttctgaacactgcgtcaacgtccacaacgaattat
tcgtcaatttcgaatgagtttgttcaattgtcggtgccgaaaatcgtcaaacagattcgt
tcacgctggcaggcgcgattaatgctgaacagtcaaatatcggcattggagaataaaagt
ttcacctcaacgtcgctcaaccagaaagcagcccgcatttcgagcagcctacttcaatgg
actgcaatcacttgggaagagtactgtagctcattgtcgacaaagcgatttgtcgatgcg
aatgtgatcacttcacacgatctactgtatcgtgcggtaatcacacgaggttcggccaag
ttggagtgttttgttgggatcaacgcaaactatccgactgaaatgccattaagtgcactg
gaactgagctggaacgggcgccacaatgctgatagcagtgcagccatccgggacctggaa
gcatgggtgaatctgatcgacgacccgaaaaataccagcaacgtgttggaactgcagatc
catcgtgcactgtctagcctggacatctatttggagacagaaggaactctgatcaattca
tccgaatttcaggcgactaaaacgttcctgaaggcttttcgcgatcgtacgcattctcga
ccgtacaaaatgatggagaacagtggcagtgttgtctacacacaaatttag
DBGET
integrated database retrieval system