Bradysia coprophila: 119079065
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Entry
119079065 CDS
T08269
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119079065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bcoo03041
]
119079065
Spliceosome [BR:
bcoo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
119079065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
PRP4
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_SPT8
WDR54
PurA
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
119079065
NCBI-ProteinID:
XP_037042768
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MASDDEDDKIYVKKTNTIHYGSLEETLSERLENISDDSNDFTELKPERVKSPVQANIHTS
SDYFDLEQEVSKDKIALLEEFERRRKARQINVSTDDVEVKKDLRRLNEPICLFGEGPAER
RRRLKELLSNLGENAIKQKIQEEEERKQLQKEQETTWYHEGPDALRVSRFWIANYSLPRA
KERLENARSMLELPSATKAGRMVELQKKIQSLALECSQVGDTRPISNCCFNDTSSLLLTS
SWSGMCKVWTIPDCTLVQTLRGHVAYVGGVSMRNGVTRDDPNVVAMATGGSDGTVKLWSF
GSEESIADITGHVPHRVSRLAFHPSGRFLGTACYDSSWRLWDLEQKQEVLHQEGHAKAVH
CISFQIDGSVCVTGGLDAFGRVWDLRTGRCVMFLEGHLGSIYGVDFSPNGYNIASASQDN
SVKIWDLRRRQPVYTIPAHVNLVSDIKYQKEGGHFLISSSYDCTTKIWSNKTWQPLKTLQ
GHDGKIMSVDISPNSQYIATTSYDRTFKLWSPEY
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagacgacgaggatgataagatttatgtgaaaaagacaaacacaatccactac
ggctcgctggaggaaacattaagcgaacgcttggaaaacatttccgatgattccaacgac
tttaccgaattgaaaccggaacgtgtcaaatcgccggttcaagcaaacatccacacttcg
agcgactatttcgatttggagcaagaagtatccaaagataaaattgcgttgcttgaagag
ttcgaacgaagacgcaaagcccgacagattaacgtcagtacagacgatgtggaagtgaaa
aaagacttgcgacgtctcaatgaaccaatctgtttgttcggcgaaggaccagctgagaga
cgacgacgattaaaggaattgctttcgaatctaggggagaatgccataaaacagaagatc
caagaagaggaggagagaaaacagttacaaaaggaacaagagacaacgtggtaccacgaa
ggaccggatgcattgagagtgtccagattttggatagcaaattattcattgccacgggcg
aaagaacgactggaaaatgcccggtcaatgttggaactgccaagtgccaccaaagccggt
cgaatggttgaacttcagaagaaaattcaatcgttagccctcgaatgcagtcaagtaggt
gacacacgtcccatcagcaactgctgtttcaatgacacctcttcactgctactaacatcg
agttggtcgggcatgtgtaaagtgtggacgattccagactgtactcttgttcaaacactt
cgtggtcacgttgcttacgtgggtggtgtttcaatgcgtaacggtgtgactcgagatgat
ccgaatgtcgttgcaatggcaaccggtggatcggacggaaccgtgaaactttggtcattc
ggcagcgaagaatcgatagctgacattaccggacatgtaccgcatcgagtgtcacggctt
gcttttcatccgtccggccgtttcttgggcacagcttgttacgattcatcttggcgtctg
tgggatctggaacagaagcaagaggtgttgcatcaggaaggtcacgccaaggctgttcat
tgtatttcctttcaaattgacggaagtgtttgcgttactggaggtctggatgcgtttggt
cgtgtttgggatttgcgaaccggtcgctgtgtgatgtttctggagggtcatcttgggtca
atatacggcgttgacttttctccgaacggctacaacattgcctcagccagtcaagacaat
tcagtaaagatttgggatctgcgtcgacggcagccggtgtacaccattcctgcacatgtt
aacctagtgtcggacatcaaataccagaaggagggtggtcattttctgatatcatccagc
tacgattgtaccacgaagatttggtcgaataaaacatggcaaccgttgaagacgttgcaa
ggtcacgacgggaaaattatgagcgtggacatttcacccaattcacaatacattgccaca
acatcgtacgatcgaacattcaaattgtggtcgccggaatactaa
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