Bradysia coprophila: 119080145
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Entry
119080145 CDS
T08269
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119080145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcoo03019
]
119080145
Messenger RNA biogenesis [BR:
bcoo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
119080145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_16
TPR_11
TPR_14
TPR_19
TPR_8
ANAPC3
TPR_17
TPR_CcmH_CycH
TPR_7
TPR_6
ChAPs
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
119080145
NCBI-ProteinID:
XP_037044257
LinkDB
All DBs
Position
Unknown
AA seq
1245 aa
AA seq
DB search
MSSKGIKNTLKEAREAIKIKDFPSAIQKCTKILETDENHYMALILLGAAYQDSDKQQAAK
YLKLALKSADDPTIAIQGLANCAENSELPDIYDKLLNLTPEKYRDLHQKLVNVSEKLQSV
DPCLVVFKKEIDSELSDRSSSAYECLSQIALRVSEFDSQWNDMILEALERSVNGEIGATH
KEKCKVLLRLLHKLKFNDQVVQRSCQITEIYPDDPTAYEWICKMYVDKIDDDSFDIQAHL
KLPILEYITHLMSIGRTAIPLLANAVYLIKEKNEFIESRNILNEVNGLRPDWFSCQKYLA
LVNIKLRANSLAELFARQSKSSLLLIRSLLRQNVKEKTDEAVELCKILIPSATPSNMTEF
LELHATGLLLSRKSDASMKIIEQLRQTESLQCDILLATKYQLDGDLNRAIEHLNNSNDNN
QCEHHLMLGQYLFTSKKLELALTHFLRATRIEPYNSDCFFWLGKVYLTSNDQVRAQKCFE
KCVYLYPQHQQGVTLLSAMYRQTMDWDGNKTLLQSAANAITGQQCKWARIQLGFHYLALK
NFNDAIQAFRMALREDSDDLSCWEGLADAYFQRGSYNSALKVYQKISEIDPLSLYPKLQV
ANIKTILKFHKEAIDCYDDLLKEQPEFVPGLGGMAEAHLGLCYYYLPQRLLGRCKHHAEE
AVKYLIMALKLQSNFACLWRMLASALQVIACLPNSKAFLTVPGFLVNVKDEEVLLDGDKL
FELSARVYYRAIKIRSSDDLLWYELGLSYYLRAIKYGNATNRKEILELAAESAKHTIKLC
ATRWKSWNLLGVICTTKEINNLPLAQHCFVKALNIDKKCACSWTNLGVLYLIQGQIKLAN
KAFGRSQQADTGFINAWTGQAYIAERIGEEDEAMDLFKHSTSLGYSSESAVGFTHWVCSV
LHSKDLMADQKFRYTIEKLNAIPIALDSIIWFCDAEDDKATPESLCFLGYLYYRQRLWSK
AIESYKRASEKANGVMRDNIMSNLGYAFLKNNEPVKAYEAFHAVATATLKSTVGLALAHF
KAEQYEESYAVYESALNWLASSDQEKAYILIAMAAMVYKFQGEADAKTLLFQCISLSDPP
IEGLFSGCALGILHNDSQMAKLVLDELKPHESNSAVVHHIAFLKSQFYLKMRETKKALTY
LLSTVHIHPENMMLRNVLANFLLSNYKKSQKYLIAASRIAQSTICLQLTSRQSDNSSMRA
AKSMAIASEALEGVNKHLKNKLAQKAVHLNPSCREAWGALISSAE
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgaagggaataaaaaacacactgaaggaggctcgggaagctatcaaaataaaa
gattttccgtcagctatccaaaaatgcacgaaaatattggaaacggacgagaatcactat
atggctctcattttattgggagcagcttatcaagatagtgacaaacagcaggcagccaaa
tatctgaagcttgcattgaaatcagctgatgatccgactattgccattcagggtttagca
aactgtgcggaaaactctgaactgccagacatctatgataaattactgaatctgacccct
gaaaagtaccgagatctacatcagaaactggtgaatgtatcggaaaaactgcagtccgtc
gatccttgtctagttgtctttaaaaaggaaattgattctgaactctccgatcggagttcg
tctgcttacgaatgtctatcacaaatcgcattgcgtgtatcagaattcgatagccaatgg
aatgacatgatacttgaagcgttggaaagatctgtcaatggtgagataggtgcaacgcat
aaggagaagtgtaaagtactgctccggctactgcacaaactgaaatttaacgatcaagtt
gtgcaacgctcatgtcaaatcactgagatctacccagatgatcctactgcctacgaatgg
atttgcaaaatgtacgtggacaaaatcgacgacgattcgttcgatattcaggctcatctc
aaattgccgatcctcgaatacattacacacttaatgagcattggtcgaacagctataccg
ttgcttgcgaacgcagtttatttgatcaaggaaaagaatgagtttattgaaagcaggaac
attctcaatgaagttaatggcctgcgacctgattggttcagctgccagaaatatttggcg
ctggtcaatattaaacttcgtgctaattcattggctgagctgtttgcacgtcagagcaag
tcgtcgctgttgttgattcgtagtttactgcgacagaatgttaaagagaaaacggacgag
gcggttgagctgtgcaagatactaattccgagtgcaacgccaagtaatatgactgagttt
ttggaactgcatgcaactggattgctgcttagcaggaagtcagacgcatcaatgaaaatt
atcgagcaactgcgacaaacagaatcgcttcagtgcgacattttactggcaacgaaatac
caactcgatggcgacttgaacagagccatcgaacacctaaacaattcaaacgataacaac
caatgcgaacatcacctcatgctcgggcagtaccttttcactagcaaaaaactggaatta
gcgttgacacatttcctgagagccacaagaatcgagccgtataatagcgactgctttttc
tggttaggaaaagtgtacctaacaagcaacgaccaagttcgagctcaaaaatgcttcgaa
aagtgtgtgtacttgtatccacagcatcagcaaggcgtaacattgctaagcgccatgtat
cgacaaacaatggactgggatggaaataaaacgctattgcagtcggccgctaatgctata
accggccagcaatgtaaatgggctcgtattcagcttggattccattacttggcgctaaaa
aacttcaacgacgcgattcaagcattccgaatggcattacgggaagattccgacgatctg
tcgtgttgggaaggattagccgatgcgtactttcaacgtggttcatacaattcggcactg
aaagtctatcagaaaatatcggaaatcgatccgttgagcttgtatccgaaattgcaggtg
gcgaacatcaaaacaattctgaaatttcacaaagaggcgatcgattgttacgatgatttg
ttgaaggagcaaccggaattcgttcccggtttaggtggtatggcagaagcacacttggga
ttgtgctactactatttacctcagcgattactgggacgatgtaaacatcatgctgaagag
gcagtaaaatatttgataatggcgttaaagctacaaagtaattttgcttgtttgtggcgg
atgctggccagtgctcttcaagtcattgcttgcttaccgaactctaaagcatttttaacg
gttcccggattcttggtcaatgttaaagatgaagaagttttgctggacggtgacaagctg
tttgagttgtcggctagagtctattatcgtgccatcaaaattcgttcttctgatgatttg
ctgtggtatgaactgggcctcagctactatctccgtgccatcaagtacggcaacgcaaca
aatcgaaaagaaattctggaactcgctgcagaatcggcaaagcacaccatcaaactatgt
gcaacacgatggaaaagctggaatttactgggtgtcatctgcaccaccaaggaaataaat
aatcttccactcgctcagcactgcttcgtcaaagcgctgaacattgacaaaaagtgtgcc
tgcagctggacgaatcttggtgtcttatatctaattcagggacaaatcaagctggcaaac
aaagcgtttggtcgatctcagcaagcagatactggattcataaatgcttggaccggccaa
gcgtacattgccgaacgaatcggcgaagaagacgaagctatggatttgttcaagcattca
acaagtttgggctattcatctgagtctgctgtcggctttacgcactgggtgtgctcagtg
ctgcacagtaaagacttgatggccgatcaaaagtttcgctacaccatcgagaagttgaat
gctattccgatagcattggattcgataatttggttttgtgatgctgaagatgataaggca
acgccggaatcgttgtgcttcttgggatatctatattatcgtcaacgtttatggagcaag
gcaatcgaatcgtacaagcgagcaagtgaaaaggctaatggtgtgatgagagacaacatc
atgagcaatttgggctatgccttccttaaaaacaatgaaccggtaaaagcgtacgaagct
ttccatgctgttgccactgcaactcttaaatctactgttggtctggctttggctcatttt
aaagccgaacaatacgaggaatcgtatgccgtttacgaaagtgcgttgaattggttggca
tcaagcgatcaggagaaagcttacattttaattgccatggctgcgatggtatataaattt
caaggagaagccgatgcaaagacgttgctattccaatgcatcagtcttagtgatccaccg
attgaaggcttattttctggttgcgctttgggcatattgcacaacgacagccagatggcg
aaactagttcttgatgaactgaaaccgcatgaatccaattcagccgtggtgcaccacatt
gcctttctaaagtctcaattctatttgaaaatgagagagacgaagaaggcactaacatac
ctactatctactgtgcatatccatccggaaaatatgatgctgagaaacgttctagccaac
tttctactttcgaactacaagaaatcacaaaagtatttgattgccgccagtcgaatagca
cagagtacaatatgtcttcaattgacatcacgtcaaagcgataactcatcgatgcgtgca
gcaaaatccatggcgattgcaagcgaagcactggaaggcgtaaataaacatttgaaaaat
aagcttgcacagaaagcagttcacttaaatccgtcttgccgggaggcttggggtgctctc
atttcatcagcggaatga
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integrated database retrieval system
