Bradysia coprophila: 119080383
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Entry
119080383 CDS
T08269
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119080383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bcoo03041
]
119080383
Spliceosome [BR:
bcoo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
119080383
Complex C
U5 SnRNP specific factors
119080383
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
119080383
NCBI-ProteinID:
XP_037044585
LinkDB
All DBs
Position
Unknown
AA seq
2381 aa
AA seq
DB search
MAIPPYMIPPNPWLPQMMAQAQAQQAQAFAAAHAQQMHAQQIAQMQMPQGVPPAQLSSIP
TPNPKPDIITEEKLQEKAQKWHQLQSKRYADKRKFGFVDAQKEDMPPEHIRKIIRDHGDM
TSRKYRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVQVLYHITGAITFVNEIPWVI
EPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVEPLEAIQIDLD
SEEDGSVFKWFYEHKPLVGSKFVNGSTYRKWNLSLPQMATLYRLANQLLTDLVDENFFYL
FDPKSFFTAKALNMAIPGGPKFEPLIKDHNIGDDDWNEFNDINKVIIRQPVRTEYRIAFP
YLYNNMPHFVHLSWYHAPNVVYIKTEDPDLPAFYFDPLINPISHRHSIKVVETPTFDEDE
EFTLDEYVQPFLQDKPLYTDNTANGIALLWAPRPFNMRSGRMRRAIDIPLVKCWYKEHCP
PGHPVKVRVSYQKLLKYYVLNALKHRRPKPQKKRYLFRSFKATKFFQTTTLDWVEAGLQV
CRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKL
IIDSHVQYRLNNVDAFQLSDGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLVYYRF
NTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQR
VESHFDLELRASVMHDIVDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPIPIE
NMILRYVKMKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLK
DGPYISPEEAVAIYTTTVHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRL
NQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEK
ITDAYLDQYLWYEADKRRLFPPWVKPSDTEPPPLLVYKWCQGINNLQDAWDVSEGECNVL
LESRFEKLYEKIDLTLLNRLLRLIVDHNIADYMTSKNNVVINYKDMNHTNSYGIIRGLQF
ASFVAQYYGLVLDLLVLGLQRASEMAGPPQMPNDFLTFQDTATETNHPIRLFCRYVDRIH
IFFRFTAEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWD
IKNRLPRSVTTIQWENTFVSVYSKDNPNLLFNMSGFECRILPKCRTQHEEFTHRDGVWNL
QNEVTKERTAQCFLRVDDESLGRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFRE
AVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIP
QSDLRWSKQTDVGITHFRSGMSHDDDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEA
NAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWT
HQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYK
KLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQI
FRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFPAYK
WNVSRPSLLADTKDTMDNTTTQKYWLDVQLRWGDYDSHDVERYARAKFLDYTTDNMSIYP
SPTGVLIAIDLAYNLHSAYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSS
EPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQ
LFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHL
LDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRL
ILILRALHVNTERTKVILKPDKTTITEAHHIWPTLTDEEWIKVEVQLKDLILADYGKKNN
VNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTTNKHGDEIIT
STTSNYETQTFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVT
ISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMPPQWGTHQTINLPNQLPSHQYLKDMEPLG
WIHTQPNELPQLSPQDITTHAKVMSENPNWDGEKTIIITCSFTPGSCSLTAYKLTPSGFE
WGSKNTDKGNNPKGYLPSHYERVQMLLSNKFLGFFMIPAQGSWNYNFMGVRHDPNMKYEL
QLSNPKEFYHEIHRPSHFLLFSNLEDGGDGSGGADREDSYA
NT seq
7146 nt
NT seq
+upstream
nt +downstream
nt
atggcgattccgccatacatgataccgccgaatccctggctgccacagatgatggcccag
gctcaggcacaacaagcacaggcatttgctgcagcccatgctcaacagatgcatgcccag
cagatcgctcaaatgcaaatgccacaaggtgtaccacctgcacagttgagtagtataccg
acgccgaatccgaagcctgacataattaccgaggagaaattgcaagagaaggcgcagaaa
tggcatcaattgcagtcgaaacggtatgcggacaaacgaaaatttggttttgtcgatgca
cagaaggaggatatgccaccggaacatattcggaaaattatacgcgatcatggtgatatg
accagtcggaaatatcgacatgataagagagtatatttgggcgcattaaagtatatgccg
catgcggtacttaaattactggaaaatatgccgatgccgtgggagcaaattcgtgatgtg
caagtgttgtatcacatcactggagctataacatttgtcaacgaaattccgtgggtaatt
gaaccggtctacatagctcaatggggcactatgtggattatgatgcgacgagagaaacgt
gatcgaaggcatttcaaacgaatgaggtttccaccattcgacgacgaagaacccccactt
gattatgccgacaatgtgttggatgtggaaccattggaggcgattcaaattgatttggat
agcgaagaagacggcagtgtcttcaaatggttttacgagcacaaaccactcgttgggtcc
aaattcgtgaatggttcgacataccgtaaatggaatttgtcattgccgcaaatggccaca
ttgtatcgcttagccaatcaattgttgaccgatcttgtggatgaaaatttcttctattta
ttcgatccgaagagcttcttcaccgctaaagcactgaatatggcaattcctggtggaccg
aaattcgaaccgttgatcaaagatcacaacatcggcgatgacgactggaacgaattcaat
gacatcaacaaagtaatcatcagacaaccggtacgtacggaatatcgcattgcgtttccc
tatttgtacaacaacatgccgcatttcgttcatctgtcctggtatcacgcaccgaatgtg
gtctacatcaaaaccgaagatccagatttacctgccttctatttcgatccgctcatcaat
ccaatatcgcaccggcatagcatcaaagtggtggaaacgcctacgttcgacgaggatgaa
gaattcacattggatgaatacgtacagccatttttacaggacaaaccgttgtacacggac
aacacggctaatggtattgctctactatgggcacctagaccgtttaacatgagatcagga
cgaatgaggcgtgctatcgacattccattggtcaaatgttggtacaaggaacactgtcca
ccaggtcatcccgttaaagtacgtgtcagctaccagaaactacttaagtactacgtgctg
aatgcactgaaacaccgacgcccgaagcctcaaaagaaacggtacctgttccgctcattc
aaagcgaccaaattcttccaaacaacaacgttggattgggtcgaagctggcttgcaggtg
tgtcggcagggatacaacatgttaaatcttctcattcatcgaaagaatttgaattacctt
catctggattacaacttcaatttgaaacccgttaagacattgaccacaaaagagcgaaag
aagtctcggttcggaaatgcgttccatttgtgcagagaaattctgcgtctcacgaagctc
atcatcgattcgcatgttcaatatcgcctgaacaatgtggacgccttccagctgtcagat
ggtttgcagtacatcttcgctcatgtcggtcaattaacgggaatgtaccgttacaagtac
aaattgatgagacaaattcgaatgtgcaaagatttgaagcatttggtctactatcgattc
aacacgggtccagttggaaaaggtcctggttgcggtttctgggctcctggttggcgtgta
tggttgttcttcatgcgtggcatcacaccactattggaacgctggttgggcaatctatta
tcacgtcagttcgagggtcgtcattcgaaaggtgttgccaaaacagtgacaaagcaacgt
gtcgaatctcacttcgatttggagttgagagcatctgtaatgcacgacattgtcgacatg
atgccagaaggaatcaaacagaacaaggcccgtaccatcctgcagcacttatcggaagca
tggcgttgctggaaggctaacattccgtggaaagttcccggactgccgattccgatcgaa
aacatgattcttcgatatgtgaaaatgaaggctgactggtggacgaacacagcccattac
aatcgtgaacgtattcgacgtggtgcaacggttgataaaaccgtttgcaagaaaaatctc
ggtcgcttaacgcgtttgtacttgaaagccgaacaagaacgacaacacaactacctgaaa
gacggtccatacatttcaccggaagaagctgtagctatttacacaaccaccgtacattgg
ttggaatcgcgtcgatttgcgccgattccattccctccgttgtcgtacaaacacgacacg
aaattgttgatattggcgttggaacgattgaaggaagcgtacagtgtcaaatcgcgtctg
aaccaaagtcaacgtgaagaactcggtttgatcgaacaggcgtacgataatccgcacgag
gcattgtcaagaatcaaacgtcatttgctgacgcagcgagccttcaaagaggtcggaatc
gagtttatggatctatacagtcatctgatacccgtttacgacgtggaaccactggaaaag
atcactgacgcttacctcgatcagtatctgtggtatgaagcggacaaaagacgtttgttc
ccgccatgggtgaaaccaagcgatacagaaccgccaccgttgttagtctataagtggtgt
caaggtatcaacaacttgcaggacgcatgggacgtgtcggaaggtgaatgtaatgtattg
ctagagtcccgtttcgagaaattgtacgagaaaattgatttaacgctgctcaatcgtctg
ttgcgtttgattgtcgatcacaacattgccgattacatgacgtccaaaaataacgttgtc
atcaactacaaagacatgaaccacactaacagttatggcatcattcgtggtctgcaattt
gcatcgttcgttgctcagtactacggtcttgtactcgatctgctggtccttgggttgcaa
cgggcgagtgaaatggcaggtcctccacaaatgccgaacgattttctgaccttccaagat
acagcgaccgaaacaaatcatccgatacgtttgttctgtcgctatgtagatcgaattcac
attttcttccggtttaccgccgaggaagcgcgtgatttgattcaacgttacctgactgaa
catccagatccgaataacgaaaatatcgtcggctacaataacaaaaagtgttggccccgt
gatgcccgaatgagattgatgaagcatgatgtcaacctgggacgtgccgttttctgggac
ataaagaacagacttcctcgatcggtgaccacaatacaatgggaaaatacgtttgtgtct
gtttactcgaaggacaatccgaatttgctgttcaacatgtcaggtttcgagtgtcgaatc
ttaccaaaatgtcgaactcagcacgaagaattcacgcatcgcgatggcgtatggaattta
caaaatgaagtgaccaaagaacgaacagcgcagtgtttccttcgggtcgacgacgaatcg
ctgggtcgtttccacaatcgtgtccgtcaaattctgatggcatccggatcgacaacattc
acgaaaattgtgaacaaatggaacaccgccctgatcggtttgatgacctacttccgagag
gctgtggtcaacacccaagaactgctcgatctgctggtgaaatgtgaaaacaaaatccaa
actcgaatcaagattggattgaattccaaaatgccgtccagatttccgccggttgtgttt
tacacgccaaaggaattgggcggacttggtatgcttagtatgggtcatgtgttgattcca
caatccgatttacgatggtccaagcaaaccgacgtaggcattacgcatttccgttcgggt
atgtcgcatgatgacgatcaattgattccgaatttatatcggtacattcaaccgtgggaa
tccgaattcattgactcgcagcgtgtatgggctgagtatgcactgaaaagacaagaagct
aatgcacaaaatcgacgcttgacattggaagatttggaagacagttgggacagaggaata
ccgagaatcaacaccctgttccaaaaggatcgtcacacattagcctatgacaagggctgg
cgtattcgaacagaattcaaacagtatcaagtcttgaagcagaatccattctggtggacg
catcaacgccacgacggcaagctgtggaatttgaacaattatcgaaccgatatgattcaa
gcattgggcggagttgaaggaatcttggagcatacactgttcaagggcacatacttccca
acatgggaaggtttgttctgggaaaaagcgtccggcttcgaagagtcaatgaaatacaag
aaacttaccaatgcacaacgttccggtttgaatcaaatcccgaatcgtcggtttaccttg
tggtggtcgccgacaattaaccgagccaatgtctacgtaggcttccaggtccaattggat
ttgactggtatattcatgcacggcaaaattccgacgttgaaaatttcgctgattcaaata
ttccgtgcgcatttgtggcaaaagatccacgaatccatcgtcatggatttgtgtcaggtg
ttcgatcaagaactggatgcactggaaatcgaaactgttcaaaaggagaccatccatcca
cgtaaatcatacaaaatgaattcgtcgtgtgctgacatcttactgtttccggcttacaaa
tggaatgtatcgcgaccatcattgttggctgacacaaaagatacgatggacaatacgact
actcaaaaatattggcttgacgttcagttgcgttggggtgattacgattcgcacgatgtt
gaacgttacgctcgtgctaaattcttggattacacaaccgataacatgtcaatttatccg
tcgcccactggtgttttgatcgctatcgatttggcctacaatttgcacagtgcatatggc
aattggttccctggatgtaagccgttgattcaacaagccatggccaaaataatgaaagca
aatcctgcactgtatgtcctacgagaacgtatccgaaaggcacttcaactgtacagttcg
gaacctactgaaccgtatctgtcctcgcagaattatggtgaattgttctccaatcaaatc
atttggttcgtcgacgacacaaacgtatatcgagtgaccatccacaaaacattcgaagga
aatttaacgacgaagccgatcaacggagctattttcattttcaatccgcgtacaggacag
ttgttcttgaagattatccacacttcagtatgggcgggtcagaaacgtttgggccagttg
gccaaatggaaaacagccgaagaagttgcggccttgattcgttcattacctgttgaagaa
caaccgaaacagattattgtcacgcgaaagggtatgttggatccgctggaagtgcatctg
ttggatttcccgaacatcgtgatcaaaggatctgaattgcagctaccgttccaagcctgt
ctgaaggttgagaagttcggagatttaattctaaaagcaaccgaaccgcagatggtcctg
ttcaatttgtacgacgattggttgaagaccatttcttcatacacggcattctcacgtttg
attctaattttacgtgcacttcatgtgaatacggaacggacgaaagtcattttgaaaccc
gacaagacaaccatcaccgaagcacatcatatctggccaacactgactgatgaggaatgg
attaaagtagaagttcaactcaaagatctcatcctggccgattacggtaaaaagaacaac
gtgaatgttgcgtcgttaacacaatccgaaattcgtgacatcattttgggtatggaaata
tcggcaccatcagctcagcgtcaacaaattgctgaaattgagaaacaaaccaaggaacag
tcacagctcacagcaacaacaactcgaactaccaataaacatggcgatgaaatcatcaca
tcgaccacttcgaattacgagactcaaactttcagttcgaaaacagaatggagggtccgg
gctatttcagcgacgaatcttcacctccgcacgaatcacatttacgtcagttcggacgat
atcaaggagacgggctacacatacattttgccgaagaatgtgctcaagaaattcgttaca
atttccgatttgcgagcacagattgctggttacctgtacggggttagtccaccagacaat
ccacaagtaaaagaaatccgatgcattgtcatgccaccgcaatggggtacacatcagacc
attaatttaccaaatcagttgccgtcacaccagtatttgaaagacatggaaccacttggc
tggattcacacacagcccaatgaattgcctcaactttccccacaagatattacaacacac
gccaaagtgatgtcagagaatccgaattgggatggcgaaaaaaccatcatcataacgtgc
tcgttcacacccggttcctgttcattgacagcatacaaactgacgccatccggcttcgaa
tggggatcgaagaacaccgataaaggaaacaaccccaaagggtacttacccagtcactac
gaacgggtgcaaatgttgttgtccaataaattcctcggtttcttcatgataccggcgcag
ggcagttggaattacaatttcatgggcgtacgacacgatccgaacatgaagtacgaattg
cagttatccaatccgaaggaattttatcacgaaatacatcgaccatcgcatttcttattg
ttttcgaatttggaagatggtggcgatggaagtggcggtgctgatcgagaggattcgtat
gcgtaa
DBGET
integrated database retrieval system
