Bradysia coprophila: 119080869
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Entry
119080869 CDS
T08269
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03018
RNA degradation
bcoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119080869
09123 Folding, sorting and degradation
03018 RNA degradation
119080869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcoo03019
]
119080869
03041 Spliceosome [BR:
bcoo03041
]
119080869
Messenger RNA biogenesis [BR:
bcoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119080869
mRNA degradation factors
5'-3' decay
Lsm complex
119080869
Spliceosome [BR:
bcoo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
119080869
Complex C
U2 snRNP components
119080869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
119080869
NCBI-ProteinID:
XP_037045344
LinkDB
All DBs
Position
Unknown
AA seq
94 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGALHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPGDEVDTQLLQDAARKEAVTTR
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgcttttctactcatttttcaagtcattggtcggcaaggatgttgttgtggaactgaaa
aacgatttaagtatctgcggcgccctacattctgtggatcaatatctgaacattaaactg
accgacatcagtgtaaccgatccggaaaagtatcctcatatgctgtcagtgaagaattgt
ttcattcgtggctcggttgtgcgatacgttcaattgcccggcgatgaagttgatacacag
ttgctgcaggatgctgccagaaaagaagcggtcacaacgcgataa
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integrated database retrieval system
