Bradysia coprophila: 119081639
Help
Entry
119081639 CDS
T08269
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119081639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bcoo03041
]
119081639
03009 Ribosome biogenesis [BR:
bcoo03009
]
119081639
Enzymes [BR:
bcoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119081639
Spliceosome [BR:
bcoo03041
]
Complex A
U1 snRNP components
U1 related factors
119081639
Complex B
119081639
Ribosome biogenesis [BR:
bcoo03009
]
Eukaryotic type
Pre-60S particles
Helicases
119081639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
119081639
NCBI-ProteinID:
XP_037046606
LinkDB
All DBs
Position
Unknown
AA seq
849 aa
AA seq
DB search
MFHGNNFGFFRPPRAEGQEQYGGQRVYPNQFQYPDFQSRFEPRRDFGGPRREFGGPRSGQ
PNGFVNKNLYDKNMPPRFNSYQKPELKNEFMTKEDRAKLQSEKAKNPGKGLEAPKWDKLD
PFEKNFYVPHANAVTRTEEEIADFRKKLEITVMGSSVPQPTQQLEESNFPESVMIEMKKQ
GFTTPTSIQAQGWPIALSGRDMVGIAQTGSGKTLAYMLPAIVHIQNQPRLQRGDGPIVLV
LAPTRELAQQIQAVTHDYGLNSNPLIRHTCIFGGSPKGPQARDLDRGVEVIIATPGRLID
FLERGVTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQTLA
EDFLNEYIQINIGSLNLAANHNIRQFIEICQEEEKEGRIINLLREIAADRTNKIIVFVET
KKKVEDILKSIRQEGFAATSIHGDKSQPERDFVLTDFRTGKSSILIATDVAARGLDVEDV
KFVINYDYPNSSEDYIHRIGRTGRCQQSGTAYTFFTPGNARQARELVSVLEEAGQHPSGD
LLEMARLTGGGKGRNRWPTRANPVPMGNPMKNSFNNYGNNQSGKVMYPKNNWQVRPDGAN
SGNANDKPAHWKHPQQNRQVNDGSFNTWRNSDSDRNFTKPNLGPRFQQYDNNNVDMQQMQ
YRQPRPNYQGRNNFVRAPNSFNMNQQQGGYQGNRPFYQSRTHNPQNRPYNPSYQRNQYHQ
SGDQVSGESSPNNQIDCYTGPANGDEIASNAYPMNGAAYPAANSPQSAPMYATGPPPSTA
QYMVDAGVQNIIGSRFFQGSRGIPSGQMPPPQQSNPCGYQNMPAAPSGPYGQYPSPYYPY
TPPAAAVQQ
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgttccacggaaataattttggattttttcggccacccagagcagaaggtcaagaacaa
tatggcggtcaacgagtctatccaaatcagtttcaatatccagactttcagtctcgtttc
gagccgagacgagactttggcggtccacgacgagaattcggtggtccaagaagtggacaa
ccgaacggtttcgtgaacaaaaatttatacgacaaaaatatgccgccccggttcaattcg
taccagaagcctgaattgaaaaacgaattcatgacaaaggaagaccgtgctaaattgcaa
agtgagaaggcgaaaaatccaggaaagggtctcgaagcaccgaaatgggacaaattggat
ccgtttgaaaagaatttctatgtacctcatgcgaatgcggtgactcgaactgaagaagag
atcgctgattttagaaagaaattggagatcaccgtaatgggtagtagtgttccgcaaccg
acacaacaattggaagaatcgaattttcccgaatcagttatgattgaaatgaaaaagcaa
ggttttacgacgccaacttccatccaagctcaaggctggccaattgctttaagtggccgt
gatatggttggtatcgcacagactggatcgggaaaaacattagcatatatgctaccggct
attgtccacattcaaaatcagcctcgtttacaacgcggtgatggaccgattgtattggtg
ttagcaccaacaagagaattagcccaacagatacaagctgtaacacatgactatggcctt
aattcgaatcccctcattaggcacacatgcatttttggtggttcgccaaaaggtccccaa
gctagggatttagatcgcggtgttgaggttattattgcaacaccgggacgtttgatcgat
tttcttgaacgtggagtgaccaacttacgacgatgcacataccttgtactcgacgaagct
gatcgtatgcttgatatgggattcgagccacagattcggaaaatcattgaacaaattcga
ccagacagacaagtgcttatgtggtcagctacttggcccaaggaagtgcagactctggcc
gaagatttccttaacgagtacattcaaataaacattggttcgctaaacctggcggccaat
cataacattcgtcaatttattgagatctgccaggaggaggagaaggaaggtagaatcatc
aatttgctgcgcgaaattgctgccgatcgaacaaacaaaatcatcgtttttgttgaaacc
aagaagaaagtcgaggacatattgaaaagcattcgccaggaaggatttgccgcaacctcg
attcatggagacaaatcccaacctgaaagagattttgtgttaaccgattttcgaacgggc
aaatcgtcaatacttattgcaacagatgtagctgcccgtggcttggacgttgaagatgta
aagttcgtaatcaattatgactaccccaattcatccgaagattatatacatcgtattgga
cgaactggacgttgccagcaatcaggtacagcctacacatttttcaccccaggaaatgct
aggcaggcacgcgaattggtgagcgttttggaagaagctggtcagcatccttcaggtgat
ctgttagaaatggctcgcttgaccggtggtggaaaaggtcgtaaccgctggccgactcgt
gccaatcctgtgccaatgggtaatccaatgaaaaattcatttaacaactacggtaacaat
caatccggtaaagttatgtacccgaaaaacaattggcaagtgcggccggacggagccaat
tcggggaatgcaaacgataagccagcccattggaagcatccacaacaaaaccgacaagtt
aacgatggcagtttcaacacatggaggaattcggatagtgatcgcaatttcacgaaacct
aatctgggtccaaggttccaacagtacgacaataacaacgttgatatgcaacaaatgcaa
tatcgtcagcctcgaccaaactatcaaggtcgaaacaatttcgttagagctccgaattca
ttcaacatgaatcaacaacaaggcggatatcagggaaatcgaccattttaccaatcacgt
acacacaatccacagaaccgaccatacaatccaagctatcaacgcaatcaataccatcaa
agtggtgaccaggtgagcggcgagtcgtcgccgaacaatcaaatcgattgttacactggt
ccagccaatggtgacgagattgcatccaacgcatatccaatgaatggtgccgcttatcca
gcagccaattctccgcaatctgctccaatgtatgcaactggtcctcctccttcgactgcc
cagtacatggttgacgcaggcgttcaaaacattattggaagtcgattcttccaaggttcg
cgtgggatcccatcgggacagatgccaccaccacaacaaagtaatccgtgtggttatcaa
aatatgcctgctgcaccatcgggtccttatggacagtacccatcaccatattatccatac
actccaccagcagcagctgttcaacagtaa
DBGET
integrated database retrieval system
