Bradysia coprophila: 119082202
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Entry
119082202 CDS
T08269
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03030
DNA replication
bcoo03410
Base excision repair
bcoo03420
Nucleotide excision repair
bcoo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119082202
03410 Base excision repair
119082202
03420 Nucleotide excision repair
119082202
03430 Mismatch repair
119082202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcoo03032
]
119082202
03400 DNA repair and recombination proteins [BR:
bcoo03400
]
119082202
DNA replication proteins [BR:
bcoo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119082202
DNA repair and recombination proteins [BR:
bcoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119082202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
Rad17
AAA_5
AAA_30
AAA_18
RuvB_N
AAA_14
PTCB-BRCT
BRCT_2
AAA_17
nSTAND3
AAA_33
NTPase_1
AAA_16
TIP49
AAA_2
AAA_28
AAA_7
RNA_helicase
RCF1-5-like_lid
Motif
Other DBs
NCBI-GeneID:
119082202
NCBI-ProteinID:
XP_037047531
LinkDB
All DBs
Position
Unknown
AA seq
991 aa
AA seq
DB search
MSRDIRSFFTVGAKKAPTTQPTSDSKQKKKKSVIDSSDEDDPSPSTKIVKSVKTPSTSNK
RRIVYSDDDDNNTPNRKKPNLSKPVTSKEQPKLKLVEDVSDMFGDKPVKRVDKPVANKTM
TEEEINSHFMDDLDVSAVPDLDVDVNVNKVNGRPKEVESMDDSVVESTPKVNKQKGRTDK
KTSAKKASLDTSVLSDEDRHERKRQAAMLYQQFKNRSGPSLPGSKEIPKGKPNCLNGLTF
VLTGVYESLERDEAADIIKEYGGKVTTSLSKKTSYIVVGEEAGLAKIAKADDLGTKRLTE
DGLLDLIRTKSGLPPKEAPSGVSPTKGEKSTTAKVNSTDKTPSKTSATPKEINDSNISPK
KIKGERKTPMKQPSSLTIGEQVKKERTTPKKEGSSSGSVPSKRTKIEKSVDIAVDRKLSE
HQLNIASVDNQAWVEKYKPTDIKQIIGQQGAASNVVKLQNWLSKWYSNHDGKKKLQKPNP
WAKNDDGSYYKAALLSGPPGVGKTTTATLVAKELGFYTVEMNASDTRSKRLLKEEVSELL
SNKSLAGYFNGSSSATTKKHVLLMDEVDGMAGNEDRGGIQELISLIKDSSIPIICMCNDR
NHQKMRSLVNYCYDLRFSRPRLEQIRGAMLSICFKEKFKLTPTAIDEIISATNNDIRQTI
NHLTLMSANNSITLSQTKQDTAKKDMKLGPWDVVRKVFSADEHKTMSFADKADLFFNDYS
MGPLFVQQNYLIVAPKAPKARIPAHVAMTADSLSLGDLVESRIRSKNAWSMLPIQAMYSS
VLPGEYMAGNFTGQINFPAWLGKYSKSTKRKRMAQELHDHTRIRTSGSRLSIRMDYAPYL
IEKIVKPLRDRGMEGVDEALAVLKEYRLLREDIDSLIELTTWPGKKNPMDAIEGKVKAAL
TRAYNKEVTAYTYTATAAVKKKKSEKSNDEFEIGFGEEEDGAGPDGSDEEENESVEMDVL
IKAKKKSTSTKGTDATSGSKKAGNNSRKAKK
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagagacatacgttcatttttcacggtcggtgcaaagaaagcgccaactacgcag
ccgaccagcgattcaaaacaaaagaagaagaaatcagttattgattccagtgatgaggat
gatccatcaccttcaacgaagatcgtgaagtcggtaaaaactccttctacttcgaataag
cgtcgcatcgtttattcggacgatgatgataataacacaccgaatcgcaagaaaccaaat
ctgtcgaaaccggttacgtcaaaagaacaaccaaaattgaagcttgtggaagatgtatcc
gatatgttcggagataaaccggtgaaacgggtcgacaagccagtggccaacaaaacaatg
acagaggaggaaataaacagtcactttatggatgacttagatgttagcgctgttcctgat
ctggatgtggatgtcaatgtgaataaagtaaatgggcgaccgaaagaagtagaatcgatg
gatgacagtgtggttgagagcactccgaaagtaaataagcagaagggacgcactgacaag
aagacatctgctaagaaagcttcactggacacgagcgtcctgagcgatgaagatcgtcac
gaacgaaagcgacaggctgcaatgctatatcagcaattcaaaaataggagcggtccctcc
ttgccaggcagcaaagaaattccaaagggtaaaccgaattgtctcaatggactcacgttt
gtgctgacgggtgtctatgaatcactagaacgtgacgaagcagctgatataattaaagaa
tacgggggcaaagttacaaccagtctgtcgaagaaaacaagttacattgtcgttggcgaa
gaggctggactagccaaaatagccaaggccgatgatttgggcacaaagcgtttaactgag
gacggattacttgatttgattcggactaaatcgggactaccgccgaaagaagctccatct
ggcgtttctccaacaaaaggagagaagtctaccacagctaaagtgaactccacggacaag
acgccatcaaaaacgtctgcaacaccgaaagaaatcaacgacagcaacatttctcccaag
aaaatcaaaggagaacgtaaaactccgatgaagcaaccgagttcattaacgattggagaa
caggtcaaaaaggagcgtacaactccgaaaaaggaaggctccagttcaggatctgttcca
agtaagcgaactaaaatcgaaaagtctgtcgacattgccgtcgatcgaaagctcagcgaa
catcagctgaacatagccagtgttgataatcaagcatgggttgagaaatacaaaccgaca
gacatcaagcagataatcggtcagcaaggggccgcgagcaatgttgtcaagcttcaaaat
tggttgagtaaatggtactccaatcacgacggcaaaaagaaactgcagaaacctaatccg
tgggccaaaaatgatgacggcagctactacaaagcggcactgttgtcgggacctccaggc
gtaggtaaaacaactacagccactttggtagcgaaggaacttggattttatacggtggaa
atgaacgcgtcagacacacgatccaaacggctgctgaaagaagaagtgtcggagctgttg
tcgaataaatctctggccggatactttaatggttccagtagcgcgacaacaaagaaacac
gtactgcttatggatgaggtcgatggcatggcaggcaatgaggaccgtggcggaatccaa
gagcttatatcgctcataaaagattcgtccattcccattatatgtatgtgcaacgaccgt
aatcatcagaaaatgcgatcgctggtgaattactgctacgatttacgattcagtcgaccg
cgtttggaacaaattcggggcgcgatgttgtcaatttgtttcaaagaaaaattcaaacta
acgccgacagccatcgatgaaatcatttccgctacgaacaatgacattcgtcaaaccatt
aaccatttgacgctaatgagtgccaacaattcgataactctgtcacagactaaacaggat
acggcaaagaaagacatgaagctgggaccgtgggatgtggtgcgtaaagtgttttcagcc
gacgaacacaaaaccatgtcatttgctgacaaagcggatctatttttcaatgactacagc
atgggaccgttgtttgttcagcagaattatttgattgtggctccaaaggcaccaaaggcc
agaattcccgcccatgttgctatgacggctgacagtttgagtcttggtgatctcgttgaa
agtcgcattcgatcgaaaaatgcttggtccatgttacccattcaggctatgtacagttcc
gtactaccgggtgagtacatggccggaaattttactgggcaaatcaattttcccgcttgg
ctggggaagtattccaaatcgactaaacggaaacgcatggcacaggagcttcatgatcac
accagaatccgcacatccggatcgcggctttccattcggatggactatgctccatacttg
attgagaaaatcgtcaaaccactgcgggatcgaggcatggaaggtgttgacgaagcgttg
gccgtgctgaaagaataccgtttgttgcgcgaagacattgattcgttgattgagttgaca
acgtggccaggcaaaaaaaatccaatggacgcgattgagggaaaagtcaaggcagctctc
acacgagcgtacaacaaggaggttaccgcttatacgtatacagcgaccgctgctgttaag
aaaaagaaatcggaaaaatcaaacgatgaatttgagattggatttggggaagaagaagat
ggagccggtccggatggatctgacgaggaggaaaatgaaagtgtggaaatggatgttcta
attaaagccaaaaagaaatctacatccacgaaaggtaccgatgctacaagtggcagcaag
aaagctggaaataacagtcgcaaagcgaagaagtag
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