Bradysia coprophila: 119082607
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Entry
119082607 CDS
T08269
Name
(RefSeq) sm-like protein LSM4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03018
RNA degradation
bcoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119082607
09123 Folding, sorting and degradation
03018 RNA degradation
119082607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcoo03019
]
119082607
03041 Spliceosome [BR:
bcoo03041
]
119082607
Messenger RNA biogenesis [BR:
bcoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119082607
mRNA degradation factors
5'-3' decay
Lsm complex
119082607
Spliceosome [BR:
bcoo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
119082607
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
119082607
NCBI-ProteinID:
XP_037048065
LinkDB
All DBs
Position
Unknown
AA seq
150 aa
AA seq
DB search
MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDTWMNINLREVICTSKDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDAQVKSRGRQDMKGGRGGQNQRGGNRGGNQGGNRPFAQR
GRQQGREGGGGGGGGGGGGGQMNHNRKPKQ
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgttacctctctctttattgaaaacggcacaaagtcacccgatgttggtcgagctgaaa
aatggagagacatacaacggacatttggtcagctgcgacacatggatgaacatcaatctc
agagaagtgatttgcacatccaaggatggtgataaattttggcgtatgcccgagtgctac
atccggggcagtacaatcaaataccttcgtattcccgacgaagtcattgacatggtgaaa
gaagatgcacaagttaagtcgcgtggtcgtcaagatatgaaaggtggacgaggtggccag
aatcaacgcggaggaaatcgtggtggcaatcaaggaggcaaccgaccgtttgcacagcga
ggacgacaacaaggcagagaaggtggtggtggtggcggcggcggcggcggtggtggtggt
caaatgaatcacaatcgaaaaccaaaacaataa
DBGET
integrated database retrieval system