Bradysia coprophila: 119085118
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Entry
119085118 CDS
T08269
Name
(RefSeq) nuclear exosome regulator NRDE2
KO
K26109
nuclear exosome regulator NRDE2
Organism
bcoo
Bradysia coprophila
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcoo03019
]
119085118
Messenger RNA biogenesis [BR:
bcoo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
119085118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
POP1_C
CCDC106
Motif
Other DBs
NCBI-GeneID:
119085118
NCBI-ProteinID:
XP_037051275
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MFPAYSTAKSTETETDKNSDKKDLNWLANPSFEKYEPPIIPIDEDSKQSDEDVQPSTSHS
SRSSHKKKRKKDHKEHKSDRKERKSKKEEPQQVVEVMEFDGTEEYYVDKKAERGYLRVQT
LHKPACPRYRTYFAGVIGHIRRERFTNVRRYFLKGKKDRIEVGDWNKEESLSEEDFSIKN
KEYNRQLGENPGNVQLWLQFINHQDLSNMKSTKTQVVERKLDILNKALRENPKNEDLYKL
YIQVIDRAFPSFEVSKTLDQLISKDLTNYTLWNAQVLATQGSMARCNVADVLKLYEQCMK
NMYNRNRYDEVMLKLFTNCALFLRQSGLYEQMFALLKLALELNVAENKFAKIQPSESDQN
LLIEYEEVILQSGLPMNEIWLRIEKLRQNFYFLPCPENRSCSDPQRMVFNEDIVHFVYPL
ANRSYAFNLMIIVLRLLKVPMPGHSLRECFFTKQEHCSEFDSIEDILSVFLYKTFRKCDT
FETVMMDFVKDFSIGPSYIPSHIGYEIYFGIVLEYLATASECFPGDTVRKNILVMLWLKF
ERILLIFDRIAGKVTDERAKQLRTKVKTLLKREENRNVLVFYGEYALIEYELGRMDSMEN
VFHTALGETKLSDNDCTRADFYATFVLYVEILLREERVEQAIRSLTCLGLDVSLRESAKM
EVTEPKKLQAMKKLADRVRDLVFIERNVSVMELEQCFMSDYLISLMKANVYYTYLIKSKQ
LAVEQINVWIRTFVEINNRHAFIRENLYEMLVDVLELPSKSGMENNATVYDAVQRGLSEF
PNNLLLLRTAATMEGQTWFKIRSLLTAAHSPVSILFLVMSAKYRFIKYSQNCNDDTLFLD
SLSSNIDSSETAYKTRVCNLLKSETSNSIARKNSLLWRIYLKSLLDVHKDFEKSRNALFA
ALDECPWNKALYLDGTVYIPQELPHLQDLIIEKQLRIYALPEELEILRSDDVNITNK
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgtttccagcttactccaccgcaaaatcgacagaaacggagaccgataaaaactcggat
aaaaaagacttgaattggctcgcgaatcccagttttgagaagtacgaaccgcctataata
ccaatcgacgaggattcgaaacagtcagatgaagatgttcagccgtcaactagccattca
tcacggtcgtcacacaagaagaaacgaaagaaggatcacaaagagcacaaatcggatcgc
aaggaacgcaagtcgaaaaaagaagaaccacaacaagtcgtcgaagtaatggagtttgat
gggactgaagagtactatgtcgacaagaaggccgaacggggatatcttcgtgtgcagact
ctacataaaccagcttgtccaagatatcgtacgtacttcgcgggtgtgattggacacatt
aggcgggagcgattcaccaatgtcagacggtactttttaaagggtaaaaaggacagaatc
gaggttggcgattggaataaggaggaaagtttgagcgaagaggacttttcgatcaaaaac
aaagagtacaaccgacagttgggcgagaatcccggaaacgttcaactatggttgcaattc
atcaatcaccaggacttgtccaacatgaagtcgacaaaaacacaggtggtcgaacgtaaa
ttggacattctgaataaggcgctgcgagagaatccgaaaaacgaagacttatacaagctg
tacatacaagtgatcgaccgggcgtttccgtcattcgaagtgagcaaaacgttggatcaa
ttgatatcgaaagacctcaccaattacacgctgtggaacgcccaagtgttagcaacacaa
ggatcgatggcccgttgtaacgttgctgatgtgctcaagttgtacgaacaatgcatgaag
aacatgtacaaccggaaccgatacgatgaagttatgttgaaactgttcacaaattgtgcc
ctcttcttacgccaatctggtctgtatgagcagatgtttgcactgttaaaattagctctg
gagctcaatgtcgctgaaaataaattcgccaaaatccagccatccgaatcggatcaaaat
ctgctcattgaatacgaagaagtgatactgcagtccggtctgccaatgaacgaaatttgg
ttgcgtatcgaaaagttgcgacaaaatttctacttcctgccctgtccggaaaatcgttca
tgcagcgatccacaacgaatggtattcaacgaagacatcgtgcacttcgtttatccactg
gccaatcgttcgtacgcgttcaatttaatgatcatcgtgttgcgattgctgaaagtaccg
atgcccggacattcgttgcgcgaatgttttttcaccaaacaggaacactgttcggagttt
gacagcattgaggacattctgtcggtgttcttgtacaaaacgtttaggaaatgtgacacc
ttcgaaacggtgatgatggactttgtcaaagacttctccatcggaccatcgtacataccg
tcacacattggctacgaaatctatttcggaatcgttcttgaatacttagcgacagcaagt
gagtgctttccgggtgacacagtccggaagaatattttggtgatgctgtggctgaagttc
gaaaggattttactgattttcgatagaatcgccggtaaagttaccgatgaacgggcgaaa
caactgcgcaccaaagtgaaaacgcttttgaaacgcgaagaaaatcgaaatgtgttagtg
ttctacggggaatatgctttgatcgaatatgaactgggccggatggactcaatggaaaat
gtgttccacacagcgctcggcgaaacaaaactttcggacaatgattgcacccgcgctgat
ttttacgcaactttcgtactgtatgtggagatactgctgagagaagaacgagtcgagcag
gcgatacgatcattgacatgtctcggattggacgtatcattgagagaatcggctaaaatg
gaagtcacggaacccaaaaaattacaagccatgaaaaagctcgctgaccgtgtacgcgac
ttggtgttcatcgaacgtaatgtgtctgtgatggaattggaacagtgttttatgtccgac
tatctgatcagcttaatgaaagccaacgtatactacacatatctgatcaaatcgaagcag
ttggctgttgaacaaatcaatgtttggattcgaacgtttgtcgagatcaacaatcggcat
gcattcatccgcgagaatctgtacgaaatgttggtggacgttttggaattgcccagcaaa
agtggaatggaaaacaatgccacggtttacgatgcagtgcagagaggactgtcggagttt
ccgaataatttattgttgctgaggactgctgctaccatggaaggacagacatggttcaaa
attcgatcactcctaaccgcagcccactctcccgtttcaatactgttcttggtcatgtcg
gcaaagtatcggttcatcaaatactcacagaattgtaacgacgatactctgtttctggat
tcgttatcgtcaaacattgacagtagtgagactgcctataagaccagagtgtgcaatttg
ttgaaaagtgagacgtccaattcgattgcaaggaaaaattcgctgctgtggagaatttat
ttgaagagcctactcgatgtacacaaggatttcgaaaagagtcgtaacgcactttttgcg
gcattagacgaatgtccttggaataaggctttatacctcgacggaactgtgtacatccct
caagagcttccacatttacaagatctcataattgagaagcagctgagaatctatgcccta
cccgaggaattggagattttacgtagtgatgatgtgaatataaccaataaataa
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