Brevibacillus composti: JD108_02565
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Entry
JD108_02565 CDS
T07811
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
bcop
Brevibacillus composti
Brite
KEGG Orthology (KO) [BR:
bcop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcop03021
]
JD108_02565 (sigB)
Transcription machinery [BR:
bcop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JD108_02565 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
DUF134
HTH_23
IF2_N
HTH_37
HTH_3
KORA
PhyR_sigma-like
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
QQE74882
UniProt:
A0A7T5JP85
LinkDB
All DBs
Position
474334..475122
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AA seq
262 aa
AA seq
DB search
MTGQSRKQKPNREELARIVSDYRETGDSRLQEELVCAYTPLVEALAKKFVRGQIPYEDLI
QVGMIGLLASFRRFDPGFGRSFESFAVPTIVGEMKRFIRDKTWSVHVPRRVKELSPKIKR
VVDELTVTLQRSPQISDIAARLGVTPEEVLETLEMGRSYLSLSMDSELDADCEGNTFTLF
DLIGSEDEGYQHIDQHLLLDRALQVLDHREKEIIQLTFYENLSQKQAGDLLGMSQMHVSR
LQRRALAKLREALRVDQEEYYT
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtcaatcacgaaaacagaagcctaatcgcgaggaattggcgcggatcgtcagc
gattaccgggagacgggggacagtcgcttgcaggaggagctggtctgtgcctatacgccg
ctggtggaagcgctggcgaaaaaattcgtgcgcggacagattccttatgaagacctgatt
caggtggggatgatcgggttgttggcgtccttccggcggtttgatcccggttttggccgt
tcctttgagagcttcgcggtcccgacgattgtcggcgagatgaaacgatttatccgggac
aagacgtggagcgtccacgtcccccgccgggtcaaggaactcagtcccaaaatcaagcgg
gtcgtggatgaattgaccgtcaccctgcaaagatcaccgcagatttccgatatcgctgcc
cgactgggagtgacaccggaagaagtcctggagacgctggagatgggacgcagctatctc
tcgctctccatggacagcgaactggatgcggactgcgaaggcaatacgtttaccctcttt
gatctgatcggcagcgaagacgagggctaccagcatatcgatcagcatctcttgctggat
cgggcgctgcaggtcctggatcatcgggaaaaagaaatcattcagcttaccttttacgaa
aatctcagtcaaaaacaggcgggagatctgctgggcatgtcccagatgcatgtgtcccgt
ctgcagcggcgggcattggccaagctgcgggaggcattgcgggtggatcaggaagaatat
tatacgtaa
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