Brevibacillus composti: JD108_07065
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Entry
JD108_07065 CDS
T07811
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
bcop
Brevibacillus composti
Brite
KEGG Orthology (KO) [BR:
bcop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcop03019
]
JD108_07065
Messenger RNA biogenesis [BR:
bcop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JD108_07065
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
QQE75637
UniProt:
A0A7T5EN53
LinkDB
All DBs
Position
1368013..1368960
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AA seq
315 aa
AA seq
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MKYLLDYQEGERVVAYCLVKSKEAGVASNQSEYLNLELGDRSGTIAAKLWDVGPELKEAI
QVKSIVKIDAVVQTYRGKKQLVIQRIRLATAADEVSMESLVPVSPVPPEELWEKLTKAVD
SLKSPTLKTIVTEALRDPETGERLRSYPAGVRMHHQYYHGLLEHIVSLLAAAERLLPLYP
QVDRDVLVATCILHDIGKLYELSDPIAPEYTTPGQLIGHLVMGVEMVSGICRKHGIPLGD
AEVLHLKHCILSHHGEVENGWGSAVSGKTPTAILFHYLDMIDSKMNALGQTLTDMGEEEE
WAYSAVVKRKIWRGF
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatctgctggactatcaagagggagagagggtagtcgcgtactgcctggtaaaa
agcaaagaagcgggcgtggccagcaatcagagcgagtacctcaatctggaactgggagac
cgctcgggcacgatcgcagccaagctgtgggacgtagggcctgagctgaaagaagcgatc
caggtcaagtccatcgtaaaaatcgacgcggtcgtgcagacctatcgaggtaaaaagcag
ctcgtcatccagcggatccggcttgccacagccgctgatgaagtatcgatggagtcgctg
gtcccggtctctcccgtcccgcctgaggagctgtgggaaaagctgaccaaagcggtagac
agcctgaagagcccgacgctgaaaacgatagtgacagaggcgctgcgggatccggagacg
ggtgaacgcctccgctcctatccggctggcgtgcggatgcatcatcaatactaccacggc
ttgctggagcatatcgtctccctgctcgcggcggcggagcggctgctcccgctctatccc
caggtggaccgggatgtgctggtggccacttgcatcctgcacgacatcggcaagctgtac
gagctgtccgatccgatcgctcccgaatacacgacgccgggccaattgatcggccatctg
gtgatgggcgtcgagatggtgagcggcatctgccgcaagcacggcattccgctgggagac
gcggaggtgcttcatctcaagcactgcatcctcagccaccacggcgaggtggagaacggc
tggggcagcgcggtctcgggcaagacgccgacggcgatcctttttcactatttggacatg
atcgacagcaagatgaacgccctcggccagaccttgaccgacatgggagaggaagaggag
tgggcgtattccgctgtcgtcaaacgaaaaatctggcgcggcttctga
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