Brevibacillus composti: JD108_09480
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Entry
JD108_09480 CDS
T07811
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
bcop
Brevibacillus composti
Pathway
bcop03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bcop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
JD108_09480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcop03400
]
JD108_09480
DNA repair and recombination proteins [BR:
bcop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
JD108_09480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DZR
Motif
Other DBs
NCBI-ProteinID:
QQE76067
UniProt:
A0A7T5JQB2
LinkDB
All DBs
Position
complement(1824360..1825283)
Genome browser
AA seq
307 aa
AA seq
DB search
MHTVWKGSISFGLVNIPVRMFTATEERDVRFRQLHKKCHTPIRYAKVCPHCDEEVSAEEI
VRGFEYEKGNYVIVTDEDLEAITPETRRAIEIMDFVDLQEIDPVYFDKSYFLSPQETGDK
AYALLRAAMQETGKIAVARVTMRNRESLAVIRLYQHCIMMETIYYPDEVRPVSQVPALPE
ADIPLADNERKMAAELVNNMTAAFDPAKYTDQYRVNMHALIEKKKEGKEVAVAPAAPRAN
VVDLMQALRESLAATGGNAAPARIEPEPTPSPLPAKKAAQAPSKQPQPETATTTTTKKLR
RKKAETS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcatacggtttggaaggggtcgatcagctttggtctggtcaatatccctgtgcgaatg
tttacggcgacggaagagcgggacgtccgcttccggcagcttcacaagaagtgccacacg
ccgatccgctacgccaaggtatgtccgcattgcgacgaggaagtgagcgcggaagagatt
gtgcgcggcttcgaatacgaaaaaggcaactacgtcatcgtcaccgatgaagatctggaa
gcgatcactccggagacgcgcagagccattgaaatcatggacttcgtggacttgcaggaa
atcgatcctgtctatttcgacaaaagctacttcctctccccgcaggagacgggagacaag
gcctacgccctgctgcgcgccgcgatgcaggagaccggaaagattgccgtcgcccgggtc
acgatgcggaacagggagagcctggccgtgatccggctgtaccagcactgcatcatgatg
gagacgatctactatccggatgaagtgcggccggtatcgcaagtgcctgcactgccagag
gcagacatcccgctcgccgacaatgagcggaagatggcggctgagctggtcaacaacatg
accgccgccttcgatccggccaaatacaccgaccaatatcgagtaaacatgcatgcgctg
atcgagaaaaagaaagaaggaaaggaagtggccgttgcaccggcagcgccgcgggcgaat
gtcgtggacctcatgcaagcgctgagggaaagtctggccgccaccggcgggaatgctgcc
cccgcccgcatagaaccggagccgacgccctctcctcttcccgccaaaaaagcggcgcag
gctccctcgaagcagccgcagcctgaaacggctacgacgacgacaacgaaaaagctgcgc
cgcaaaaaagcggaaacctcgtaa
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