Brevibacillus composti: JD108_10305
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Entry
JD108_10305 CDS
T07811
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bcop
Brevibacillus composti
Pathway
bcop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JD108_10305 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcop03019
]
JD108_10305 (rny)
Messenger RNA biogenesis [BR:
bcop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JD108_10305 (rny)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
YdiH
DUF2232
DUF3149
Motif
Other DBs
NCBI-ProteinID:
QQE76216
UniProt:
A0A7T5JQK8
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Position
1987928..1989481
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AA seq
517 aa
AA seq
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MSMLANPIIMMIVLVAVLLVGFAIGYFIRKSIAEAKISSAEEAAKQIVEEAKRDAEAVKK
EKVLEAKDEVFKLRSEAETELRERRNEIQRQERRILQKEEALDRKMEQLERKEEELAERD
RTIADMQSKVEHLYKEQVAELERISGLTQDEAKTIILTEVEQTVRHEMAVMIKEIETQAK
EEADKRAREIITTSIQRCAADHVAETTVSVVTLPNDEMKGRIIGREGRNIRALETLTGID
LIIDDTPEAVILSGFDPIRREIAKTALDKLVADGRIHPARIEEMVEKARREVDERIREYG
EQATFETGVHGLHPDLIKILGRLRYRTSYGQNVLKHSMEVAHLAGLMAAELKEDVKLAKR
AGLLHDIGKAIDHEVEGSHVEIGVELAKKYNEHPVVVNSIASHHGDTEPTSVIAMLVGAA
DALSAARPGARRETLETYIRRLEKLEEISESFDGVEKSYAIQAGREIRVMVQPDKIDDAE
ATRLARDITKRIENELDYPGHIKVTVIRETRAVEYAK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgttagcgaatcctattatcatgatgattgtgctcgtagccgtgctgcttgtc
ggatttgctattggctactttattcgcaaatcgatcgcggaagcgaagatctccagtgcc
gaagaagcggcaaagcagatcgtagaggaagccaaacgagacgcagaagccgtcaagaag
gaaaaagttctggaagccaaggatgaagtgtttaaacttcgttccgaagcggagacggaa
ctgcgcgagcggcgcaatgaaatccaacgccaggaacgccggatcttgcaaaaggaagag
gcgctggatcggaagatggaacagctggagcgcaaagaggaagaactggctgagcgcgac
agaaccattgcggacatgcaaagcaaggtggagcacttatataaagagcaggttgctgag
ttggagcgtatctccggattgacacaggatgaagcgaaaaccatcatcttgaccgaagta
gagcagacggttcgccatgagatggctgtcatgatcaaagagatcgagacccaggccaag
gaagaggcggacaagcgcgctcgcgaaattattacgacctcgattcagcgttgtgcagca
gaccatgtggcggagactaccgtatccgtcgtcacgctgccaaacgacgagatgaaagga
agaattatcggtcgggaaggacgcaacattcgggccctggagacgcttaccggtattgat
ctgatcatcgatgatacacctgaagcagtgattctctcaggctttgatccgattcggagg
gagattgctaaaaccgctctggacaagctggtggcagacggacggattcacccggcccgc
atcgaggaaatggtggaaaaagctcgtcgtgaagtggatgagcgcatccgtgaatacgga
gagcaggccacctttgaaacaggcgtacacggcctccatccggatctgatcaagattctg
ggacgcctgcgctaccggaccagctacggtcagaatgtgttgaagcactcgatggaagta
gctcatctcgccggtctgatggcagcggaattgaaagaagacgtgaagcttgcaaaacgc
gccggtcttctgcacgatatcggaaaagcgatcgaccacgaagtggaagggtcacatgtg
gagattggagtcgagctcgccaagaagtacaacgaacatcctgttgtcgtcaacagtatc
gcctctcaccacggggataccgagccaacatcggttatcgcgatgctggttggagcagcg
gacgctctgtctgccgcgcgccccggtgcacgccgcgaaacactggaaacctacatcaga
cgtttggaaaagctggaggaaatctccgagtcgttcgacggggtagagaaatcgtacgcc
attcaggcagggcgcgagattcgcgtcatggtgcagcctgacaagatcgacgatgcggaa
gccactcgtctggcccgcgacattacgaagcgaattgaaaatgaactcgactatccgggt
catatcaaagtaacggtaatccgtgaaaccagggcagttgagtatgcaaagtaa
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