Brevibacillus composti: JD108_12475
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Entry
JD108_12475 CDS
T07811
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
bcop
Brevibacillus composti
Brite
KEGG Orthology (KO) [BR:
bcop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcop03032
]
JD108_12475
03036 Chromosome and associated proteins [BR:
bcop03036
]
JD108_12475
03400 DNA repair and recombination proteins [BR:
bcop03400
]
JD108_12475
DNA replication proteins [BR:
bcop03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JD108_12475
Chromosome and associated proteins [BR:
bcop03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JD108_12475
DNA repair and recombination proteins [BR:
bcop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JD108_12475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_1
SIS_2
DUF6470
Motif
Other DBs
NCBI-ProteinID:
QQE72767
UniProt:
A0A7T5JM61
LinkDB
All DBs
Position
complement(2420381..2420653)
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AA seq
90 aa
AA seq
DB search
MNKTELIAKVAETTELTKKDATKAVDAVLDAIAEALKQGDKVQLIGFGNFEVRERAARKG
RNPQTGEEIEIASSKVPAFKPGKQLKDSIK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagaactgattgcgaaagtggctgaaaccactgaactgacaaagaaagat
gcaacgaaagctgttgatgcagttctcgatgcaatcgctgaagccttgaagcaaggcgat
aaagtccaactgatcggttttggcaactttgaagttcgcgaacgtgcggctcgtaaaggt
cgcaacccgcaaacaggcgaagagatcgaaatcgcttccagcaaagttcctgccttcaaa
cctggtaaacaactcaaggactctatcaagtaa
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