Brevibacillus composti: JD108_14470
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Entry
JD108_14470 CDS
T07811
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bcop
Brevibacillus composti
Pathway
bcop03030
DNA replication
bcop03430
Mismatch repair
bcop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JD108_14470 (holA)
03430 Mismatch repair
JD108_14470 (holA)
03440 Homologous recombination
JD108_14470 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcop03032
]
JD108_14470 (holA)
03400 DNA repair and recombination proteins [BR:
bcop03400
]
JD108_14470 (holA)
Enzymes [BR:
bcop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JD108_14470 (holA)
DNA replication proteins [BR:
bcop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JD108_14470 (holA)
DNA repair and recombination proteins [BR:
bcop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JD108_14470 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
QQE73116
UniProt:
A0A7T5EI88
LinkDB
All DBs
Position
complement(2839177..2840226)
Genome browser
AA seq
349 aa
AA seq
DB search
MPLHTAIREIRQKQFAPIYVLYGPESFLAEEFMTLAKREMIDPAYADLNLSVYDCMETPL
AEILQDAETLPFLGEHRLVIARQAYFLTGSKPPTKLENSDTSGLLPYLEEPPSYTTLILC
TEADKLDERKKLVKSLQQKARMLAFQPLRDAELYAWVERQAEKYQASIQRPQAARLVERV
GGELRLLDKELEKLALYAGREGGVITDEVIDKLASRTLEQDVFALIESIAAGRLDKALRM
LYDCLQTGEEPIRLLALMARQFRLLLHIRQWGPRGYSQQQLAGMLKVHPYAVKKAGEQAR
HFSEASLRRLLAILAEEDFRMKSGQVDKRLALELFMTRVFEERAKTKNP
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttcatacggctattcgggagatcagacaaaagcagtttgcgccgatctatgtc
ttgtatggacccgagtcctttctcgccgaggagttcatgacgctggcgaagagagagatg
atcgatccggcctatgcggatttgaatctgagcgtatacgactgcatggaaaccccgctg
gcggagatcctgcaggatgcggaaaccctgccctttttgggcgagcatcgcctcgtcatc
gcgagacaagcgtactttctgactggcagcaagccgccgacaaaactggagaacagcgat
acaagcggactccttccttatctggaggagccgccgtcgtatacgacgctgatcctgtgc
acggaggccgacaagctggacgagcgcaagaagctggtaaaaagtctgcagcaaaaagcg
agaatgctcgcgtttcagccgctgcgggatgccgagctgtacgcgtgggtggagcggcag
gccgaaaagtaccaggcgagcatacagcggccgcaggcggccagactggtggagcgcgtc
ggcggggagcttcggctattggacaaggagctggaaaagctggctttgtacgcagggaga
gaaggcggcgtcataacggatgaagtgattgataagctggcctcgcgcacactggagcag
gacgtctttgcgctgatcgagtcaatcgctgccggaaggctggacaaggcgcttcggatg
ctgtacgactgcctgcagacgggagaggagccgatccgcctgctggcgctgatggcccgt
cagttccgcctgctgctgcacatcaggcagtgggggccgcgagggtattcccagcagcag
ttggccggtatgctgaaggtccatccgtatgccgtgaaaaaagccggagaacaggctcgt
catttctctgaggcttcgctgcgccgccttttggccatcttggccgaagaggacttccgg
atgaagtcgggccaggtggacaagcgcctggcgctggagctctttatgacccgtgtgttt
gaagagagagccaaaacaaaaaacccgtga
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