Brevibacillus composti: JD108_16000
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Entry
JD108_16000 CDS
T07811
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
bcop
Brevibacillus composti
Pathway
bcop00020
Citrate cycle (TCA cycle)
bcop00190
Oxidative phosphorylation
bcop00650
Butanoate metabolism
bcop00720
Other carbon fixation pathways
bcop01100
Metabolic pathways
bcop01110
Biosynthesis of secondary metabolites
bcop01120
Microbial metabolism in diverse environments
bcop01200
Carbon metabolism
Module
bcop_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bcop_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bcop_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
bcop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JD108_16000 (sdhA)
00650 Butanoate metabolism
JD108_16000 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
JD108_16000 (sdhA)
00720 Other carbon fixation pathways
JD108_16000 (sdhA)
Enzymes [BR:
bcop01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
JD108_16000 (sdhA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
GIDA
HI0933_like
FAD_oxidored
NAD_binding_8
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
QQE73390
UniProt:
A0A7T5EIU5
LinkDB
All DBs
Position
complement(3157346..3159106)
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AA seq
586 aa
AA seq
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MAKGKLIIVGGGLAGLMATIKAAEKGVPVELFSLVPVKRSHSVCAQGGINGAVNTKGEGD
STWEHFDDTVYGGDFLANQPPVKAMCDAAPGIIYMLDRMGVMFNRTPEGLLDFRRFGGTK
HHRTAFAGATTGQQLLYALDEQVRRFEAEGLVTKYEYWDFLGVVLDDKGACKGITAQNLR
SSEIKSFRADAVILATGGPGIIFGKSTNSIINTGTAASAAYQQGVIYANGEMIQIHPTAI
PGDDKLRLMSESARGEGGRVWTYKDGKPWYFLEEKYPAYGNLVPRDIATREIFHVCVDLK
LGINGENMVYLDLSHKDPKELDVKLGGIIEIYEKFVGDDPRKVPMKIFPAVHYSMGGMWV
DYNQMTNIPGLFAAGECDYSQHGANRLGANSLLSAIYGGMVAGPKAIEYINGLDESAEDL
SSALFDSFAKEQQDKYDAILKMDGTENAYLLHKELGEWMTDNVTVVRYNDRLQKTDEKIQ
ELMERYKNININDTSKWSNSGASFTRHLWNMLVLARVITLGALNRNESRGAHYKPEFPER
DDENFMKTTMAKYNPETTAPEIYYEEIDVSLIPPRKRDYTSDKKKK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggtaaactgatcatagtcggtggtggtttggccggcttgatggctaccatt
aaagcagcagaaaaaggcgttcccgtcgagttgttctccctggttccggtgaagcgatct
cactccgtctgtgcgcagggtggaatcaacggtgccgttaacacaaaaggggaaggcgac
tccacttgggagcattttgatgatacggtttacggcggagacttcctggcgaaccagccg
cctgtaaaagcgatgtgtgacgccgcgccaggcattatctacatgctggaccggatgggc
gtcatgttcaaccgtacgccggagggactcttggacttccgccgcttcgggggaaccaag
caccaccgtaccgcatttgcgggagcgacgacagggcagcagctgctgtacgcgctggac
gagcaagtccgccgctttgaagcggaaggtctcgtcaccaaatacgaatactgggatttc
ctcggcgtcgtattggacgacaagggtgcctgtaaggggattaccgcccaaaacctgcgc
tcctcggaaatcaaatccttccgcgcagatgccgttattttggcaacgggcggaccgggg
atcatctttggtaaatccaccaactccatcatcaataccggtacggccgcatctgctgcg
taccagcagggcgtcatctatgcgaacggcgaaatgatccagattcacccgacggcgatt
cctggcgacgacaagctgcgcctgatgtccgaatctgcccgcggtgaaggcggacgcgtc
tggacctacaaagacgggaagccgtggtacttcctcgaagaaaaatatccggcctacgga
aacctggtgccgcgcgatattgcgacgcgggaaatcttccacgtctgcgtagacttgaag
ctgggcatcaacggcgagaacatggtgtatctcgacctgtcccacaaggatccaaaagaa
ttggatgtcaaactgggcggtatcatcgagatttacgagaagttcgttggggatgacccg
cgtaaagttccaatgaaaatcttcccggctgttcactattccatgggcggcatgtgggta
gactataaccaaatgaccaatatccctggcctgttcgcagcaggtgagtgcgattactcc
cagcacggtgccaaccgtctcggcgcgaactccctcctgtccgcaatctacggcgggatg
gtggcaggaccaaaagcaatcgagtatatcaacggcctggacgaatccgccgaggatctc
tcctctgcgctgtttgacagcttcgccaaggagcagcaagacaagtacgacgctatcctg
aaaatggacggcaccgagaacgcctacctgctccacaaggaactgggcgagtggatgacc
gataacgtcaccgtcgtgcgctacaacgaccgtctgcaaaaaacggatgagaagatccaa
gagctgatggagcgttacaagaacatcaacatcaacgacacaagcaaatggagcaactcc
ggcgcttcctttacgcgtcatctgtggaacatgctggtgctcgcccgcgtgattaccctg
ggtgctttgaaccgcaacgagagccgcggcgctcactacaagccggaattcccagagcgc
gatgacgaaaacttcatgaagaccactatggcgaagtacaatccagagacgaccgcgcca
gaaatctactatgaagagatcgatgtttctctgattccgccgcgcaagcgtgactatacg
tctgacaagaagaagaagtaa
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