KEGG   Brevibacillus composti: JD108_16730
Entry
JD108_16730       CDS       T07811                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
bcop  Brevibacillus composti
Pathway
bcop03030  DNA replication
bcop03410  Base excision repair
bcop03420  Nucleotide excision repair
bcop03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bcop00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    JD108_16730 (polA)
   03410 Base excision repair
    JD108_16730 (polA)
   03420 Nucleotide excision repair
    JD108_16730 (polA)
   03440 Homologous recombination
    JD108_16730 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bcop03032]
    JD108_16730 (polA)
   03400 DNA repair and recombination proteins [BR:bcop03400]
    JD108_16730 (polA)
Enzymes [BR:bcop01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     JD108_16730 (polA)
DNA replication proteins [BR:bcop03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     JD108_16730 (polA)
DNA repair and recombination proteins [BR:bcop03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     JD108_16730 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     JD108_16730 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_polI_exo1 5_3_exonuc HHH_5 DNA_pol_A_exo1 HHH_2 UBA_3
Other DBs
NCBI-ProteinID: QQE73520
UniProt: A0A7T5EJ61
LinkDB
Position
complement(3308851..3311499)
AA seq 882 aa
MSHLVLIDGNSIANRAFYALPLLSTSAGLHTNAVLGFTTMLLKVLEEMKPTHVLVAFDAG
KVVFRHSEFAEYKGGRSKTPPELSEQFPLIRELLDAFSIRRFELEGYEADDIIGTLTLRA
DENNWKTTVITGDKDMLQLVSDNVSVALTRKGVSEIEMYTPKEIEEKYGLKPLQIIDLKG
LMGDSSDNIPGVPGVGEKTALKLLHEYGSVEAVLDNVDKISGKKLQENLRENVDKAKLSK
ALATIMRDAPVEVNVEETSYQGYEADPVVDFFKKMEFKSLLPKVKGTATAEGGEVTEAAP
FSFEVVEEGQTSQFADKLTSPMAFYVEMDGENYHHAPILGFGLAADGVALYVPWDVAKEW
TAFREWLADESREKWVFDGKRDTVGLAWHGLELAGIRFDSYLASYLLNAAESSPQVADIA
AHYAEIRVLPDEEVYGKGAKRIVPESDVLSEHVARKAAALWQCVPRIRTEVEASRLDELL
KRIEEPLSLVLAAMEKQGVKVNESRLQQMGEELDAQLEKLTEQIYELAGTSFNINSPKQL
GEILFDKLDLPVLKKTKTGPSTSADVLEKLAPYHPIIEVILHYRQLGKLRSTYIEGLTKE
IHPGTGKVHTLFNQATTATGRLSSTEPNLQNIPIRLEEGRKIREAFIPSEEGWYILAADY
SQIELRVLAHISGDENLIDAFQKDMDIHTRTAMDVFGVAQEEVTSLMRRQAKAVNFGIVY
GISDYGLSQNLNITRKEAGEFIERYFAVFSGVKKYMEDIVQQAKQDGYVTTLLHRRRYLP
DIKSSNFNLRSFAERTAMNTPIQGTAADIIKLAMIRMQEKMREKGLKSRMLLQVHDELIF
EVPEDELEIMKQLVPEVMEHALELKVPLKADVNYGRSWYEAK
NT seq 2649 nt   +upstreamnt  +downstreamnt
atgagccatttggtgttgattgacgggaacagtatcgccaaccgggcgttttacgcgttg
ccgcttttgtccacatcggcgggattgcacaccaatgcggtgctgggctttaccacgatg
ctgctcaaggtgctggaagagatgaagccgacgcatgtgctggtcgctttcgatgcgggc
aaagtggtgtttcgccacagcgaatttgcagagtataaaggagggcggagcaagacgccg
cctgagctgtccgagcagttcccgctgattcgcgagctcctggacgccttctccattcgg
cgctttgagctggaaggctacgaggcggatgatattatcgggaccctcaccctgcgtgcg
gacgaaaacaactggaaaacgaccgtgattacgggcgacaaggacatgctccagctcgta
tccgacaatgtctccgtcgcgctcacccgcaaaggcgtcagcgagatcgagatgtataca
ccgaaggaaatcgaagagaagtacggtttgaagccgctgcaaatcatcgacctcaaaggc
ttgatgggcgacagctcggacaacattccgggcgtgccgggcgtcggcgaaaagacggcg
ctgaagctgctccacgagtacggctccgtcgaggccgtgctggacaacgtggacaagatc
tcgggcaaaaaactgcaggaaaacctgcgggaaaacgtggacaaagccaagctgagcaaa
gcgctggcgacgatcatgcgcgatgctccggtcgaggtgaacgtggaggagacttcgtac
cagggatatgaggctgatcccgtcgtggacttcttcaaaaagatggagtttaagtcgctg
ctgcccaaagtgaagggaacggcaacagcggagggcggagaggtaacggaagccgcgccc
ttttcctttgaagtggtggaggagggacagacttcacagtttgcggacaagctgacctcg
ccgatggctttttacgtggaaatggacggggagaactaccaccatgcgccgatcctggga
tttggtctggcggccgatggcgtcgcgctctacgtcccttgggatgtagccaaggagtgg
acggcttttcgggagtggctggcggacgaatcccgcgaaaaatgggtatttgacggcaaa
cgagataccgtcggcctggcctggcacgggctggagcttgccggcatccgttttgacagc
tatctcgcttcctatctgctgaatgcggcggagagcagcccgcaggtggccgatatcgct
gcacattatgccgagatccgggtgctgccggatgaagaggtgtacggcaagggagcgaag
cggatcgtaccagagtcggatgtgctgagcgaacacgtggcgcgcaaggctgcagccctg
tggcagtgtgtgccgcgcatccggacagaagtggaagcgagccggctggatgagctgttg
aagcgtatcgaggaaccgctcagcctggtgctggcggcgatggaaaagcaaggcgtcaag
gtgaacgaaagccgattgcagcagatgggagaggaactggacgcccagctcgagaaactg
accgaacagatctacgagcttgccggcacctcctttaacatcaactcgcccaagcagctt
ggcgaaatcctttttgacaagctggatctccctgtgctgaaaaagaccaagaccgggccg
tccaccagcgcggatgtactggaaaaactggccccctatcacccgattattgaggtgatt
ctgcattatcgccaattgggcaagctgcgctccacctatatcgaaggactgaccaaggaa
atccacccgggtacaggcaaggtgcacaccctgtttaatcaggcaaccaccgcgacgggc
cgcctgtccagcacagagcccaatctgcagaacatcccgattcgcctggaggaaggacga
aaaatccgcgaggcctttatcccttcggaagagggctggtacatcttagcggcggactac
tcccagatcgagctgcgcgtcctggcccatatctcgggcgatgagaatctgatcgacgcc
ttccagaaagacatggacattcatacccgcacggcgatggatgtgtttggcgtagcgcag
gaggaagtgacgtcgctgatgcgccgtcaggccaaggccgtcaacttcgggatcgtctac
ggcatcagcgattacggcttgtcgcagaatctgaacatcacccggaaagaagcgggagag
tttatcgagcgttatttcgccgtcttctccggcgtcaagaagtacatggaggatatcgtc
cagcaggccaagcaggacggctatgtaaccaccctgcttcatcgcaggcgctacctgccg
gacattaaaagcagcaatttcaatctgcgctcgtttgccgagcggacggcgatgaatacg
ccgattcagggaacggctgccgatattatcaaactggcaatgatccgcatgcaggagaag
atgcgggaaaaagggctgaagagccgcatgctgcttcaggtgcatgacgaactgattttc
gaagtgccagaggacgagctggagatcatgaagcagctcgttcccgaggtgatggagcat
gcgctggaattaaaagtcccgctgaaagcggatgtcaattacgggcggagctggtacgaa
gccaagtaa

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