Brevibacillus composti: JD108_19280
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Entry
JD108_19280 CDS
T07811
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bcop
Brevibacillus composti
Pathway
bcop03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JD108_19280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcop03400
]
JD108_19280
Enzymes [BR:
bcop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JD108_19280
DNA repair and recombination proteins [BR:
bcop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JD108_19280
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QQE76696
UniProt:
A0A7T5JR43
LinkDB
All DBs
Position
complement(3840554..3841150)
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AA seq
198 aa
AA seq
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MDGNTDVHCPAAWPEELPPAGAEGCPDCGLIRHGTRMVWGEGNPNAPIMVVLDNPGSRED
REGRPFVCGTRKTLQKAAQLAGLGQEDLYVTYVLKRQPKKAYEKVVARSICMKHLLDQIE
SKSPQFIFCLGNVAVQSFFEQGEAEVKRLRKAWHAPRGIPTAVSYHPLAINRRPNLWPSF
LEDWQFHCGVPGGTGFAA
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggatggaaatacggatgtgcattgccccgcggcttggccggaggaattgccgccggca
ggggcagagggctgcccggactgcggcttgatccggcacgggacacggatggtatggggg
gaaggaaatccgaatgcaccgattatggtggtgcttgataacccgggctcgcgggaggat
cgggaagggcgcccctttgtctgcggcacgcgcaagaccctgcaaaaagcggcgcagctg
gcgggtttgggacaggaggatctgtatgtgacctatgtgctcaaaaggcagccgaaaaag
gcctacgagaaagtagtggccaggtcgatctgcatgaagcatctcctggatcaaatcgag
agcaaatcgccgcagttcatcttctgcctgggcaatgtggcggtacagtctttttttgaa
cagggggaagcggaggtgaaaaggctgcggaaagcctggcatgctccccgcggcatcccg
actgcggtttcctaccacccgctggcgatcaaccgacgtcccaacctgtggccctctttt
ttggaagactggcagtttcactgcggcgtaccggggggaacaggtttcgctgcctga
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