Brevibacillus composti: JD108_20845
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Entry
JD108_20845 CDS
T07811
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bcop
Brevibacillus composti
Pathway
bcop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JD108_20845 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcop03021
]
JD108_20845 (rho)
03019 Messenger RNA biogenesis [BR:
bcop03019
]
JD108_20845 (rho)
Transcription machinery [BR:
bcop03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
JD108_20845 (rho)
Messenger RNA biogenesis [BR:
bcop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JD108_20845 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
ATPase_2
OB_RNB
AAA
AAA_22
NACHT
Mor
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QQE74246
UniProt:
A0A7T5EKG1
LinkDB
All DBs
Position
complement(4164704..4165984)
Genome browser
AA seq
426 aa
AA seq
DB search
MLLSELEEKKLTDLYKLAKEYQIPYYSQLKKKELIFAILRARAERDGLMFMEGVLEILPE
GYGFLRPINYLPSSEDIYISQSQIRRFDLRMGDLVSGKVRPPKENERYFGLLQVEAVNGE
DPESAAERLHFPALTPLYPQNKLVLETTPERVSARLMDLIAPVGLGQRGLIVAPPKAGKT
ILLKEIANSITANRPDIHLFVLLIDERPEEVTDMQRSVQGEVIASTFDEVPENHIKVAEL
VLERAKRLVEHKKDVVILLDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFGSAR
NIEEGGSLTILATTLVETGSRMDDVIYEEFKGTGNMELHLDRKLSERRIFPAIDIRRSGT
RREELLLSKEELDKLWAIRKSMNESAEFVESFLKKLADTKTNEEFLQSIDTSKQTRGKQS
GVTAGS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgttactttcagaactggaagaaaaaaagctgaccgacctgtacaagctggccaaggaa
tatcagattccgtattactcccagctgaagaaaaaagagttgatctttgcgattctgcgg
gccagagcagagagggacggtctgatgtttatggaaggagtgctggaaattctcccggag
gggtacggcttcctgcgtccgatcaactatctccccagctcggaggatatctacatctcc
cagtcgcagattcgccgatttgacttgcggatgggagacttggtatctggcaaggtgaga
ccgcccaaggaaaatgagcgttactttggactgctgcaggtagaggctgtgaacggggaa
gaccccgaatcggcagccgaacggcttcatttccccgccttgacaccgttataccctcaa
aacaaactcgtcctggaaacgacaccagagcgagtttccgcacgcctgatggacctgatt
gcccctgttggtctcggccagcgcggattgatcgtagcgccgcccaaggccggaaaaacg
atactgctcaaggaaattgccaacagcattacggccaatcgaccggatattcacttattt
gttctcttgattgatgaacggccggaagaagtaacggatatgcagcgctccgtacaaggg
gaggtcatcgcctccacctttgacgaggttccggaaaatcatatcaaggtagccgagctg
gtgctggaaagagcgaaacggctggttgagcacaaaaaagacgtcgtgatcctgctggat
tcgattacgcgtctcgcacgtgcgtacaatctggtgatcccgccgagcggacggacactt
tccggagggattgacccggcagcgtttcacagacccaaacggttcttcgggtccgcacgc
aacatcgaggaaggcggcagcctgacgattttggcgaccacactggtagagacgggctct
cgtatggacgatgtcatttacgaggagtttaaaggcacgggcaacatggaattgcatctg
gaccgcaagctgtccgagcgccgcatctttccggcgatcgatattcgccgttcgggtacg
agacgcgaggagctgctgctttccaaagaagagttggataagctgtgggcgattcgcaaa
agtatgaatgagagcgcggagttcgtcgagtccttcctgaaaaagctggcggacacgaag
accaatgaagaattcttgcaaagcatcgatacaagcaagcaaacacgcgggaaacaaagc
ggtgtgacggcggggtcttag
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