Brevibacillus composti: JD108_21455
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Entry
JD108_21455 CDS
T07811
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bcop
Brevibacillus composti
Pathway
bcop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JD108_21455 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcop03019
]
JD108_21455 (recQ)
03400 DNA repair and recombination proteins [BR:
bcop03400
]
JD108_21455 (recQ)
Enzymes [BR:
bcop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JD108_21455 (recQ)
Messenger RNA biogenesis [BR:
bcop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JD108_21455 (recQ)
DNA repair and recombination proteins [BR:
bcop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JD108_21455 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
Helicase_Sgs1
DUF116
Motif
Other DBs
NCBI-ProteinID:
QQE76728
UniProt:
A0A7T5EQ51
LinkDB
All DBs
Position
complement(4319841..4321637)
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AA seq
598 aa
AA seq
DB search
MLQKAEEKLRTYFGYTSFRPGQQTIVKSLLSGCDTLGIMPTGGGKSICYQIPALLFDGVT
IVISPLISLMKDQVDALASAGIAAAEINSTLDAAEVRERMRKAREGVYKLLYVAPERLET
DSFMALVSELPIAMVAVDEAHCVSQWGHDFRPSYLAISRFIQSLPKRPVIAALTATATPE
VTADIQRLLSLQDERIYISGFGRDNLHLSVRKGEDRRRFIRDYLEARREQAGIVYAATRK
DVDALYDYFQERGFSVTRYHAGLSEAERARNQEAFLYDDARVMFATNAFGMGIDKSNVRY
VIHYSLPKNLEAYYQEAGRAGRDGEPSECILLFHSQDIQTQMFFIEQNQQGAERREHEYK
KLYAMIDYCRTPRCLQQYIVQYFGDHAAGECGRCGNCTNEAELADITLEAQKVFSCVKRM
RERYGASLVAQVLKGSRNKKVLEFGFDKLPTYGLMSDYTEKQIVDLIELFIAEGYLRVTE
NKYPILALGDRALPVLKGEEQVWQKVLIRPIKREEDDELFERLRQLRKELSQKEGVPPYV
IFHDSTLKELSQICPTDKETMLTIKGIGAAKFEKYGSYFLACVQEYLQKKEGAATASD
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
ttgttgcagaaagcggaggagaagctgcggacatactttggctacaccagttttcggcct
ggacaacaaacaatcgtgaagagcctgttgtccggatgcgacacgctcggcatcatgccg
accgggggcggaaagtcgatctgctaccagattcccgcccttttgttcgacggcgtcacg
atagtcatttctcccttgatttccttgatgaaggaccaggtggatgcgctggccagcgcc
gggatcgctgccgccgagatcaatagcacgctggatgccgccgaggtgcgggagcggatg
agaaaagcccgcgaaggggtgtacaagctgctctatgtcgccccggagcggctggagacg
gacagttttatggcgctcgtgagcgagctgcctatcgcgatggtagccgtcgacgaggca
cattgcgtctcgcagtgggggcatgatttccgtcccagctatctggccatctcccggttc
atccaatccctgccaaagcggcctgtcatcgcggccctgaccgccaccgccacaccggag
gtcacagcagatattcagcgtctgctcagcctgcaggacgagcgcatctacatcagcggc
ttcggccgggataatcttcatctctccgtccgcaaaggggaggacaggcgccggtttatc
cgcgactatctggaggcgcgccgcgagcaggcgggcatcgtctacgccgctacgcgaaaa
gacgtggatgccttgtacgattactttcaggagcggggcttttccgtcacccgctaccat
gccgggctgtcggaggcggagcgggcgcgcaatcaggaggcctttctctatgacgatgcc
cgcgtgatgtttgcgaccaatgcgttcgggatgggcatcgacaagtccaacgtccgctac
gtgattcactacagcctcccaaaaaatctggaagcctattaccaggaagcgggacgggcc
ggacgcgacggggagccgagcgagtgcatcctgctgtttcattcgcaggatatccagacc
cagatgttttttatcgagcagaaccagcagggagccgagcgccgggagcatgagtacaaa
aagctgtacgcgatgatcgattactgccggacaccgcgctgcctgcagcagtatatcgtg
cagtattttggggaccacgccgccggggagtgcggccgctgcggcaattgcaccaatgaa
gcggagctggctgatatcaccctggaggcgcaaaaggtcttctcctgcgtcaaaaggatg
cgggagcgctacggagcctcgctggtcgctcaggtgctgaaaggctcccgcaataaaaag
gtgctggaattcggctttgacaagctgcccacgtacggtctgatgagcgattacaccgaa
aaacagattgtcgatttgatcgagctgtttatcgccgagggctatctgcgggtcaccgaa
aacaaatacccgatcctcgcgctgggggaccgggcactccctgtattaaaaggggaggag
caggtatggcaaaaggtgctgatccggccaatcaagcgggaggaggatgacgagctgttc
gagcggctgagacagctgcgcaaagagctgtcgcaaaaagaaggcgtgccgccgtatgtc
atcttccacgacagcacgctcaaagagctgagccagatatgcccgacagacaaggaaacc
atgttgacgatcaaagggatcggggcggccaagtttgagaaatacggatcctattttctc
gcttgcgtgcaggaatacctgcagaagaaagaaggggccgctacggcatccgattga
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