Bifidobacterium coryneforme: BCOR_0041
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Entry
BCOR_0041 CDS
T03236
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bcor
Bifidobacterium coryneforme
Brite
KEGG Orthology (KO) [BR:
bcor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcor03032
]
BCOR_0041
03400 DNA repair and recombination proteins [BR:
bcor03400
]
BCOR_0041
Enzymes [BR:
bcor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BCOR_0041
DNA replication proteins [BR:
bcor03032
]
Prokaryotic type
DNA Topoisomerases
BCOR_0041
DNA repair and recombination proteins [BR:
bcor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BCOR_0041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AII74067
UniProt:
A0ABD4AFP9
LinkDB
All DBs
Position
5338..7428
Genome browser
AA seq
696 aa
AA seq
DB search
MADLNADPSEDSPEQEGLKPQEQLDSAQLDDSLSPGHYDASDLKVLEGLEAVRIRPGMYI
GSTGPRGLHHLVYEIVDNSVDEALAGYADHIEVTILPDNGIRVVDNGRGIPVDEVPGEGK
SGVEVVMTKLHAGGKFGGGGYAVSGGLHGVGISVVNALSTRIDVQVRRQGYHWHQSFRDQ
TPNAPLSKDEPLGPDEHTGTSVTFWADPAIFETTEYDFETLRSRFQQMAFLNKGLRITLT
DLRPNEETGDEVAGEEENPDEKGQTVSYQYANGIKDYVDYMVKVRKASPVEEDIIDFEAE
DLDMGISAEIAMQWTTSYSESVHTFANTISTTEGGTHEEGFRAALTTMVNRYAREKNILK
EKDDNLSGDDVREGLTAVISVKLTNPQFEGQTKTKLGNSEAKAFVQRVMTERMTDWFDSH
PSEAKSIIQKAIEASHARLAAKKARENTRRKSIFETAGMPDKLKDCQSSNPEECELFIVE
GDSAGGSAIQGRNPMTQAILPLRGKILNTERASLDRMMKSDTIESLITAVGGGYGEEFDI
NKVRYHKVIIMADADVDGAHIATLNLTLFFRYMRPMIEAGYVYVAMPPLYRLKWTKGPHD
FVYTDAERDRVLAEGKSSGRQLPKGEGIQRYKGLGEMSYQELWETTMDPENRILKKIHIE
DAEQADETFTMLMGDEVEPRRLFIQRNAHDARFIDA
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
gtggcagatcttaatgctgatccgtctgaagattcacctgagcaggaggggttgaagccc
caggaacagctggacagtgcccagctggatgactccctctcccctggtcattatgacgcc
agcgatctgaaggttctggaggggctggaggccgtgcgcatccgtcccggtatgtatatc
ggttccacaggtccccgcggcctgcaccacctggtctatgagatcgtcgacaattcggta
gacgaggcgctcgccgggtatgcggaccatatcgaagtgaccatccttcccgataacggc
atccgcgttgtcgacaacggtcgtggcatccccgttgacgaggtccccggcgaggggaag
agcggcgttgaggtggtcatgaccaagctccacgcgggcggcaagttcggtggcggcggc
tacgcggtctccggaggtctgcacggcgtgggcatctccgtggtcaacgccctctccacc
cgcatcgatgttcaggtgcggcgtcagggttatcactggcatcagagcttccgcgaccag
acccccaacgctcccctttccaaggatgaacccctggggccggacgagcataccggcacc
tcggtcaccttctgggcggatccggcgatattcgaaacaacggagtatgacttcgagacc
ctgcgcagccgcttccagcagatggccttcctcaacaaggggcttcgcatcacccttacc
gacctgcgtcccaatgaagagaccggtgacgaggtcgccggcgaagaggagaacccggac
gaaaagggtcagaccgtcagctatcagtatgccaacggcatcaaggactatgtagactat
atggtcaaggtccgcaaggcttctccggtcgaggaggacatcatcgatttcgaggccgag
gacctcgatatgggcatatcggccgaaatcgccatgcagtggacaacctcctactccgag
tcggtccacaccttcgccaacacgatttcgaccaccgaaggcggaacccacgaagagggc
ttccgtgctgccctgaccaccatggtcaacaggtacgcccgggagaagaacatcctcaag
gagaaggacgacaacctttccggcgacgatgtgcgtgagggactgacggccgtcatctcg
gtgaaactgaccaacccccaattcgaaggtcagaccaagaccaagctgggcaactcggag
gccaaggcctttgtgcagcgggtgatgaccgagcggatgaccgactggttcgattcccac
ccatccgaagctaagagcatcatccagaaggccattgaggcctcgcacgcccgtcttgcc
gccaagaaggcccgtgagaacacccggcgcaagtccatcttcgagacggcgggcatgccc
gacaagctcaaggactgccagtccagcaaccccgaggagtgcgagctcttcatcgtggag
ggtgattccgcaggcggttccgccattcagggccgcaatcccatgacccaggccattctg
ccgctgagaggcaagatcctcaacacggaacgggccagcctggaccgcatgatgaagtcc
gacacaatcgaatccctgattacggccgtcggcggcggttacggcgaggaattcgacatc
aacaaggtgcgctaccacaaggtcatcatcatggccgatgccgatgttgacggtgcccac
atcgccaccctgaacctgaccctcttcttccgctatatgaggcccatgatcgaggccggc
tacgtgtacgtggccatgcctcctctgtaccggctcaagtggaccaagggcccccatgac
ttcgtctacacggatgccgagcgcgacagggtgctggccgagggcaagtcctccggccgt
cagctccctaagggtgagggaatccagcgctacaagggtctgggagagatgagctaccag
gagctctgggagaccaccatggacccggagaaccgcatcctcaagaagatccacatcgag
gatgccgaacaggccgatgagaccttcaccatgctcatgggagacgaggtcgaaccccgc
cgtctcttcatccagcgcaacgcccatgacgcacggttcatcgacgcctga
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