Bifidobacterium coryneforme: BCOR_0184
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Entry
BCOR_0184 CDS
T03236
Name
(GenBank) RCC1 repeat-containing protein
Organism
bcor
Bifidobacterium coryneforme
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_RLD
RCC1
RCC1_2
Alsin_RLD
Flg_new
Motif
Other DBs
NCBI-ProteinID:
AII74204
LinkDB
All DBs
Position
complement(217716..222938)
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AA seq
1740 aa
AA seq
DB search
MHTWNTFHGRRFARPAVAVLAALSIMGGGLAAGAQAADTLQTTAAPYSQINGGGGQPAAA
DDGLTTPTGTTTPAATPSPSATPQSPAAATQPTTTTATPTTLATPNPLTTRQTTTPAPAG
AQAPGPQARTGSHTVTFTSQPDTQGMPAGQTIPDGKTATWPHDDPTRPGWTFNGWFQGDL
AYDFNKPVTQDLTLTAKWGKWTTSTDTGPWQGGTNVKIDTPTDQVRFSQVSAGRNFSLAL
GSDGNAYAWGSNGSGQLGQTIRGDSVAPRIVAMPEGVKFTQVSAGYNHCVALDRDGRIWT
WGNNFGGTLGRPTTDLLSNPQPGLAVVPEGVKFTAVSAGDESSMALDSNGQAWTWGYIDA
ETPHKLDMDGGTVFTAIYTALNWWTNGYTALDTDGRIWTWHSTYKPTTVDTDVRFKAYSV
DRWGFHLIAIARDGTVWTWGKNESGQLGRTPDNANPADKPGRVPGLTGATQVDAATTGSV
TEYTSFAITDTGTWAWGKNPYGQLGTGTGEITATPARVANPAGAPTDFRYTSIAASNQHT
VFLGSDGETYACGDNASGQLGNGRSSIASNTAPSIERSPLPVMTLRPVVTEVTKVLFGEA
RNIGGPYRRSDRWHATSPRHGLGTVTLTIQSTYKGVPQPDGTSQRFTYTGDTATVSFKTE
HGSPVPSQQVIVGDTARRPDDPTADDGWTFNGWFQGDKPYDFTKPVSGDTVLTARWGRWK
ADPAQGPSRGGTDVHLDTPTSRVRFAQVSAGQSHSLAVGSDGNLYAWGNNKDGQLGDGTT
TNRTAPIMAAAPAGVKFVQVSAGDSHSMALDRDGHSMALDRDGNIWTWGNNRSRQLGRST
SSNPANRPGKADTPAGMTFIAVSAGADHSMALDRDGNIWTWGYDTYKQLGSSSYSTPTPT
GVGVPEAAFASVSAGPRHSIGLDANGTAWTWGGSKSAGNDDDLLGHAGYKPAPADTTQRF
TALSAGADHSMGIARDGTVYTWGHNENGQLGRTPTGAEPAGRPGPVPGPSGATGVSAGRT
HSTAITGSGAWAWGGNQYGQLGTSDGVAPARMPNPKGAPSGFAYTGAVAGTDITLAVGSD
GDVYAVGTNSAGQLGDGTTSTTAHPDPTMVWRPVSSPVTGVLFGAKPSAGEVRRRADGWH
AASPRHRPETVPLTIRSATGQARDEDTSLRFMYTGDTATLTFTTQHGHAPDAQQVPAGEP
TRRPADPSENGWTFDGWFDGDVAYDFTRPLEHDLTVTARWHRTGRWTLSPDHGSEYGKDT
VTLTAPAAPDIRLASIDTGGTTSLGIGSDGGLYAWGDNTQGQLGDGTTTRRTTPTRVAKP
DGTGDGFTWVQAAAGRNHSAAVGSDGQLYTWGDNTQGQLGDGTTSQHTRPVKAARPDGTD
TGFTWIRAAAGDGYTMALGSDDNLYAWGSLPGGLGDTGRTASSSRPLPVRIPDGTPPAFR
YEQITAGDTHAAAIGSDGNLYTWGDNTHGQLGHDPTGTPAAAADPQQPAGYVQASAGGDH
TLAIDRQGRLWAWGRLADGTDTATPARIWTAGTADTYRFTHVSTGRNHSVATGQDHRTWA
WGDNTSGQLGHNTGTPGTPTVIAGLNTTLTASGGDTTIAIDTNGDTQAWGDNTNGQAGHG
DTNPVPGPRAATIPPQPTPAGLTIDNDTLPLRQTGAGTWQATTTAHAPGTMPVRVQWALA
GQDQPDDTSNTYTYRHTGSLPNAGGAGIILLITAGMLGIATSDANRQRRVPPTTTNTSHE
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atgcacacttggaacacgttccatggtcgtcgtttcgcgcgccctgccgtcgcggtcctg
gcggccctgtccatcatgggcggcggcctggccgcgggcgctcaggccgccgacaccctc
cagacgaccgccgccccctactcccaaatcaacgggggggggggtcaacccgcagccgcg
gatgacggcctgaccacacccacaggaaccaccacaccggccgcgaccccgtcaccctcg
gccacaccgcagtccccggcagcagcgacgcagcccacgacaaccaccgcgacacccacc
accctggccacacccaacccgctcaccaccaggcagaccaccacaccagcacccgccgga
gcgcaggcccccggaccgcaggccaggaccggcagccacacggtcaccttcacctcacag
cccgacacccagggcatgccggcaggccagaccatccccgacggcaagaccgccacatgg
ccacacgacgaccccaccaggccaggatggaccttcaacggatggttccaaggcgacctc
gcctacgacttcaacaagcccgtcacccaggacctgaccctcaccgccaaatggggcaaa
tggaccaccagcaccgacacagggccctggcagggcggcaccaacgtcaaaatcgacacc
cccacagaccaggtacgcttcagccaggtatccgcaggccgcaacttctccctggccttg
ggcagcgacggcaacgcatacgcatgggggtccaatggttccgggcagctcggacagact
atccgtggtgattcggtggctccacggatagtcgccatgccggaaggtgtgaagttcacc
caggtgtccgccggatataaccactgcgtggccctggaccgggacggcagaatctggacc
tggggcaacaacttcggcggcactctcggccgccccaccaccgatctcctatctaatccc
caacccggtctggccgtagtgccggagggcgtgaagttcaccgccgtctccgcaggcgat
gagagttccatggccctcgacagcaatggacaggcttggacttggggatacatagacgca
gagacaccccacaagctggatatggacggagggaccgtcttcaccgccatctacaccgca
ttaaattggtggacaaacggatatacggccctcgacacggacggcagaatctggacctgg
cattccacctacaaacccaccaccgtcgataccgatgtcaggttcaaggcctacagcgtc
gacaggtggggttttcatctcatcgccatcgcgcgggacgggaccgtctggacctggggc
aaaaacgaaagcggacagctgggacgcacccccgacaacgccaaccccgccgacaagcct
ggccgggtccccggcctgaccggagccacccaagtcgatgccgctaccactggatcagtc
acagaatacacttccttcgccatcaccgacaccggcacatgggcgtggggaaagaacccg
tacggccagctcggaaccggaacaggcgagatcacggccaccccagcccgggtcgcaaac
cccgccggggcccccacagacttccgctacaccagcatcgcagccagcaatcagcacacg
gtgttcctcggttcggacggtgaaacatacgcgtgcggagacaacgcgagcggccaactc
ggcaacggcaggagcagcatcgccagcaacaccgcccccagcatcgaacgcagccccttg
cctgtcatgacgttgagacccgtcgtcacggaggtcacgaaggtcctgttcggtgaggcc
cgcaacatcggcggcccctaccgaaggtccgacaggtggcacgccacctcgcccaggcac
ggcctcggcaccgtcaccctcaccatccaatccacatacaagggcgtcccccagcccgac
ggcaccagccagcggttcacctacacgggcgacaccgccaccgtgtccttcaaaacggaa
cacggctcccccgtcccgtcccagcaggtcatcgtcggcgacaccgcccgacggcccgac
gacccgacggcggacgacgggtggaccttcaacggatggttccagggcgacaagccctac
gacttcaccaagcccgtaagcggggacacggtcctgaccgcacgctggggccggtggaag
gccgacccggcccaggggccctcgcggggcggcaccgacgtgcacctcgacacccccacc
tcccgggtacggttcgcccaggtatccgccggacagtcccactccctcgccgtcggcagc
gacggcaacctatacgcatggggcaacaataaggacggccagctcggcgacggcaccacc
acaaaccggaccgcaccaatcatggccgccgcacccgcgggggtgaagttcgtccaggtg
tccgccggggacagccactccatggccctggaccgggacggccactccatggccctggac
cgggacggcaacatctggacctggggaaacaaccgctcccggcaactcggacgcagcaca
agcagcaaccccgccaacaggcccggcaaggcagacacgcccgccggcatgacgttcatc
gccgtcagcgccggggccgaccacagcatggccctggaccgggacggcaacatctggacc
tggggatacgacacatacaagcagctgggttcttcctcctattccacaccgacgcctacg
ggtgtgggtgtgcccgaggcagccttcgcctccgtcagcgcgggccccaggcactccatc
ggcctggacgcgaacgggaccgcctggacctggggcggcagcaaatccgccggaaacgac
gatgacctgctcggccatgccggctacaagcccgcccccgcggacaccacccagcggttc
acggccctcagcgccggggccgaccacagcatgggcatcgcccgggacggcaccgtctac
acgtgggggcacaacgagaacggccagctaggccgcacccccaccggcgccgagcccgcg
ggcaggccgggcccggtccccggcccgtccggcgccaccggcgtcagcgccggacgcacc
cactccaccgccatcaccggctccggggcctgggcgtggggcggcaaccagtacggccag
ctcggcaccagcgacggcgtggcccctgcccgtatgcccaaccccaagggcgcaccctcg
gggttcgcatacaccggtgccgtcgcgggcacagacattacgctggccgtcggctcggac
ggagacgtgtatgcggtcggtaccaacagtgccggtcagctcggcgacggcaccacgtcc
accacagcccacccggacccgaccatggtgtggcggcctgtgagttcccccgtcaccggg
gtcctgttcggcgccaagccgagcgcgggagaggtgcggcgccgggcggacgggtggcac
gccgcctcccccaggcaccggcccgagaccgtgcccctgaccatccggtccgccaccggg
caggcacgggacgaggacaccagcctgcggttcatgtacaccggcgacacggccaccctc
accttcaccacccaacacggccatgcccccgatgcgcagcaggtccccgcgggcgagccc
accaggaggcccgccgacccgtccgaaaacgggtggacgttcgacggatggttcgacggg
gatgtcgcctacgacttcacccggcctctggagcatgacctgaccgtgacggcccgctgg
caccggaccggcaggtggaccctgagcccggaccacggcagcgaatacggcaaggacacc
gtcaccctcaccgcacccgccgcacccgacatccgcctcgcctccatcgacaccggcggc
accaccagcctcggcatcggatccgacggcggcctgtacgcctggggagacaacacccaa
ggccaactcggcgacggcaccaccacccgacgcaccaccccaacccgggtcgccaagccc
gacggcaccggtgacggattcacctgggtgcaggccgcggcgggacgcaaccacagcgcc
gccgtcggcagcgacgggcagctctacacctggggagacaacacccagggccagctcggc
gacggcaccaccagccagcacaccagacccgtcaaggccgcccgccccgacggcaccgac
accgggttcacctggatacgggccgcagccggtgacggctacaccatggccctcggctcc
gacgacaacctgtacgcgtggggcagcctgcccggcgggctcggcgacaccggccgcacc
gccagcagcagccggcccctgcccgtacgcatccccgacgggacaccccccgcgttccgg
tacgagcagatcacggcgggcgacacgcacgccgcggcgatcggatcggacggcaacctg
tacacgtggggagacaacacccacggccagctcggccacgaccccaccggcacacccgca
gccgcagccgacccgcagcagcccgcaggctacgtccaggccagcgccggaggcgaccac
acgctcgccatcgaccggcagggacgactctgggcctggggcaggctcgccgacggcacc
gacaccgccacacccgcgcgcatatggacggcgggcacggccgacacgtaccggttcacc
cacgtctccaccggacgcaaccacagcgtcgccaccggacaggaccaccgcacctgggca
tggggagacaacaccagcggccagctcggccacaacaccggaacccccggcacacccacc
gtcatagccggcctgaacaccaccctcaccgccagcggcggcgacaccaccatcgccatc
gacaccaacggcgacacccaggcctggggagacaacaccaacggacaggcaggacacggc
gacaccaacccggtgccagggccgcgcgcggccaccatccccccacaacccacaccggcc
ggcctcaccatcgacaacgacacactccccctcaggcagaccggcgcgggcacctggcag
gccacaaccaccgcccacgcccccggaaccatgcccgtacgcgtccaatgggccctcgcc
ggacaggaccagcccgacgacaccagcaacacctacacctaccggcacaccggcagcctg
cccaacgccggaggcgcaggcatcatcctcctcatcaccgccggcatgctcggcatcgca
acatccgacgccaaccgacaacgacgcgtaccacccacaaccaccaatacttcacacgag
taa
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