Entry |
|
Name |
(GenBank) RCC1 repeat-containing protein
|
KO |
K20276 | large repetitive protein |
|
Organism |
bcor Bifidobacterium coryneforme
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:bcor00001]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BCOR_0195
|
SSDB |
|
Motif |
|
Other DBs |
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LinkDB |
|
Position |
complement(240963..247904)
|
AA seq |
2313 aa
MHNNSVSRHIARPIIGALAVLAAMGVGLMAGSDPADAQSADQSVLSRTGEDTGLQTLNPG
KGSTLSPSDTPSSPLPTPSASRPAEPAPSSTTSTPQSDSGPSQLATPNPLSGEDSDQATA
KSREPAARSGDSHTVTFTSEAGTQGMPAAQTVVDRRTATRPLSDPTRPGWTFAGWFQGDV
AYNFTRPVTKDTALTAKWGKWSISPTEGPWRGGTDVQVNLPTDQNRFAQVASGHSHSLAV
GSDGNVYVWGSNRHSEFGIADIPYSMVPLMVPMPEGVKFIQVSAGYQFSMALDSQGRVWT
WGDADFGKLGRRPDAANPANRPGMVPMPTGVTFTSISAGQKHAVALDQNGEVWTWGPSWG
SLLARPNSSSNPADIPGKAQLPAGTVFTAISAGRNHSMALAADGTVWTWGNGGDWLGHTG
TSPAAVNTNLKFTDISAGGDHSMALDAGGTLQTWGSNDYGQLGRAPTTDNPSTQPGPVPD
LTDISVIHAGNQYSAATSGTGSWAWGRNNQGQLGTNTTTDSATPTRMVAPDGAPAGFKYI
GFAANGSNQSDFRTLAIGSDGNAYGTGNGTSGELGQNTSKNSLKTVMVWRPTSREITTVI
FGDRNNAAGVYRRADGWYTSTPRQGIGTVDLIIRSTIDGIAQPDETGHQFTYTGTATTVT
FQSEHGAPIPQQEVAVGDVAQRPSDPSEDGWTFDGWFQGDVAYDFITPVTGPTTLKARWT
YGNSQWSAHPTSGPRTGGNDVRLDPPSRIAFSQVVAGGWFSLGLGSDQNIYAWGDNTHGE
LGDGTTTLRNVPVKVPMPEGVKFTQVSAGSSHAMALDSEGRVWTWGDNIYGQLGRVPNDA
NPANKPGIISVPTGVSFIAISAGYEFSVALDQDGNIWTWGNNGWKQLGRYAVEAEERKTP
GKVVMTRGATFVAISAGTGHTTALSVDGTAWTWGYQDARSGRIGSTDFHDGTGPAPVNSD
LKFTAVSSGDDYSLAIATDGTVLSWGLNEYGQLGRTPDSAHPAGRPGRIDNLSGVTDISA
SNNRSSFAITPTGTWAWGRNHQGQLGIPTNTGNDSPGVPVPTRIPAPRDAPAGFSYRRTA
ASNSNSHTLIIGSDGSTYSFGYNGGGQLGRGPTQQDSTYESASVWFPWPLTLSGVTFDGV
PAQGVVTRQTDGSWIARPPAHSPGQVELRVPWSRPGRDQGVEILPYTYLPLRHQVRFDPG
NGDPVIVQTVDEWGLAIRPDTNPTRAGYQFDGWFQGEAAYDFTQPISEDTTVTAKWSRPG
SWSRSPASGPTGGGTAITLTAPSGALGARLAGINAGGSHSVSVSSDGQVYAWGDNTHGQI
GDGTHTGRTLPTGTAAPADVLFTQATAGRNHTAALDTTGRIWTWGDNSEGQLGRGTVGGD
DSTPGLAATGDTRFTQINAGDDHTIALDTTGHVWTWGNDTYGQLGRGAAGSATGTPAIRP
MPEGTPPGLVYTQIQAGGNHSLAIANNGTLYAWGDDTYGQLGDNKTGTATATPTPVRTPT
GAPPSFTWLYLAAGKNHTLAIATDTTANTTAVYAFGSGRHGQIGKYPAEADNPLPTKSDL
PNGATILRVSAGGQTSQAIISTGALYTWGSNTNSQIGDGTNTDRTVPVAITTPGRANFTW
KRAAVGMSHTLGIDSAGTLHTWGDNTHGQLGEGTDTPRSTPGKTTFPTLQVTSTAFGARP
GGNPSPQTDDSWQVTAPARKHRPGRVPLTIRWSLNGKPQPDTDLDYTYAPSRYTVTYDTG
GGTPVPPDATVDEDGITARPATDPTRADHVFDGWFDGDTAYDFTQPIDRDMTLTAHWHQP
GHWTLSPDHGIDSGGETVTLTPPAPGGMRLAQVSAGSRNSLGIGSDGNAYAWGSNDSGQL
GDGTRTDRSTPVRVATPTGAGNGFTWTQVQAGESMGIGLGSDGNAYAWGSNTNGLGDGTS
TSSALPVRVATPTGTAPEFRYTQVAVGGQQLMALGSDGNAYAWGSNTNGLGDGTSTSSAL
PVRVATPTGTAPEFRYTRISAGDGFALALGNDGQVYSWGSNSNGRLGQGSAISGNGLLPG
PIATPVGADKAPVFTQISAGAYHALALDEDGHAWAWGRNNSGQTTPALSGDQTVPVQVPL
PQGAPEGFAYTQLAAGGSHSLAIGTNQVVYGWGDNTHGQLADGRASQQPAQAKNPDTPNQ
ALTARAISAAGDHSLAIGTSGTAYGFGQNTNHQGGTRAGSADLTEATPITIPADGVPTRI
SFDGQDSTNIRQQPDGTWQITTPAHEPGSTTARIQWTIAGYPQPDDTSNTYTYQHTARLP
NAGGIGIVLLLVVGLLTMAAAAARQRQLKRPRE |
NT seq |
6942 nt +upstreamnt +downstreamnt
atgcacaataacagcgtatccaggcacatcgccaggccgatcataggcgcgcttgccgtc
ctggccgccatgggggttggcctgatggcaggttccgacccggctgacgcacagtcggcg
gaccagtccgtactgtcccggacaggagaagacacaggtcttcagaccctgaaccccggc
aagggttccaccttgtctccctcggatacgccttcatcaccgctccctacaccgtctgcc
tcacggcccgctgaaccggcaccatcgtcaaccacttccaccccgcaatccgattccgga
ccgtcccagctggcgacccccaatccactgtcaggcgaggactcagaccaggcgaccgca
aaatcccgtgaaccggcggccagatccggtgacagccataccgttacattcacctccgag
gccggcacccaaggcatgcctgccgcccagacggtcgtcgacagaaggaccgccacccgg
cctctcagcgatcccacccggcctgggtggacctttgccggatggttccagggcgacgtc
gcctacaacttcacccggccggtaacgaaggacacggctcttactgccaaatggggcaaa
tggtccatcagcccgaccgagggaccctggaggggcggcaccgacgtccaggtgaatttg
cccacggatcagaatcggtttgctcaggtcgcatcaggccattcgcactccctggcggtg
ggcagcgacgggaacgtatacgtatgggggtccaaccgtcactccgagttcggcatcgct
gacataccctactccatggtcccgctaatggtccccatgcccgagggcgtgaagttcatt
caggtatctgcaggctatcagttttccatggccctggacagtcagggtagggtatggact
tggggtgacgccgattttggaaaactgggccggagacccgatgccgccaatcccgccaat
agacccggcatggtccccatgccgacaggcgtgacgttcacctccatcagcgccggtcaa
aaacatgccgtggccctggatcagaacggcgaagtttggacctggggaccttcatggggc
agcctacttgcacgccccaacagtagttccaaccccgcagatatacccggtaaggcacaa
ctacccgcaggcaccgtgttcacagccatcagcgcgggcagaaaccactccatggccctg
gcagctgacgggaccgtctggacctggggaaacggcggggactggctcggtcacaccggc
acatcacccgcagcggtcaataccaatctgaaattcactgatatcagcgccggcggagat
cactccatggctttggatgcgggcggcaccctccaaacctggggaagcaatgattacggc
cagctgggacgcgcgcccacaacagacaacccgtccacccagccaggccccgtccccgac
ctgaccgacatcagcgttattcacgcaggaaaccaatattccgcagccacctccggcacc
gggagctgggcctggggacgcaataatcaaggacagctcggcacaaacaccaccaccgac
tcagccacaccaacacgcatggtcgctcccgacggggcacccgccggattcaagtacatc
ggcttcgcagccaatggttcaaaccagagcgatttccggaccttggcaatcggatccgac
ggcaacgcctacggtacaggaaacggaacctccggagagctcggacagaacacatcaaaa
aactccctcaagacggtgatggtttggagacccaccagcagggagatcactaccgtcata
ttcggcgacagaaacaacgcagccggagtgtaccgccgtgctgacgggtggtacacctcc
acccccaggcaaggcatcggcaccgtcgacctcatcatccgatccaccatcgacggcatc
gcccaacccgacgagaccggccaccagttcacgtacaccggcaccgccaccaccgtgact
ttccaatccgaacacggagcccccataccccagcaggaggtggcagtcggtgacgtggcc
caacgtccaagtgatccctccgaggatgggtggacctttgacggatggttccagggcgac
gtcgcctacgacttcatcacccccgttaccggccccaccacgctgaaagcccggtggaca
tatgggaacagccagtggtcagcccatcccacttcaggcccccggacaggcggcaatgat
gtacgacttgacccaccaagccgtatcgccttcagccaagtagtagcaggtggttggttc
tcattgggcttgggaagcgaccagaacatatacgcttggggcgacaacacccacggcgag
ctgggcgacggcaccacgacattacgtaacgttccggtgaaggtacccatgcctgaaggc
gtgaaattcactcaagtatccgcaggcagcagtcatgccatggccctggacagcgagggc
agagtttggacatggggagacaatatttacggccagctcggccgtgtaccgaacgatgca
aacccagccaacaaacctggcataatctccgtgccgacaggcgtatcgttcattgccatc
agcgccggttatgaattttcagtggccctggaccaggacggaaacatctggacctgggga
aacaacggctggaaacagctcggacggtacgccgtcgaggcagaagaaaggaaaactccg
ggaaaagtggtaatgacccgtggagccaccttcgttgccatcagcgccggcaccgggcac
accacagcactgtccgtcgacgggaccgcctggacctggggctaccaagacgcacggtcc
ggacgcatcggaagtactgactttcacgacggcacaggcccagctccggtcaacagtgat
ttgaagttcacagccgtcagctcaggagatgattactccttggccattgccacagacggc
accgtcctgagctggggtctcaacgagtatggccaattgggtcgcacacccgacagcgcc
caccccgccggcagacccgggcgtatcgataacctgtccggggtcaccgacatcagcgcc
tcgaacaatcgctcttccttcgctatcacccccacaggtacctgggcctggggccgcaac
catcaagggcagctgggcatccccaccaacaccggcaatgacagtccgggcgtgcctgtg
cccacccgcatacctgcgcccagggatgcacccgccggtttctcctaccgcaggaccgca
gcttccaacagcaatagtcacacgctgatcatcggttccgatggctccacttacagtttc
ggctacaacggaggcggccagctcggacgcggccccacccaacaagacagcacttacgaa
tcggccagcgtttggtttccgtggccgttgaccctgtccggcgtcaccttcgacggagta
ccggcccagggcgtggtgacacggcagacggacggttcctggattgcgcgtcctcctgcc
cactcgccgggacaggtggagctacgggtgccctggtcacggccaggtcgagaccagggt
gtggaaatcctgccctatacatatctgccattgagacaccaggtcaggttcgacccaggc
aatggagacccggttatcgtccagaccgtggatgagtggggactggccatccggcctgac
acgaatccgacccgtgccggctaccagttcgacggatggttccagggcgaagcggcctac
gatttcacccagcccatctcagaagacaccactgtgacggccaagtggagccgtcccggt
tcctggtcacggtcacccgcatccggccccaccggcggcggcacggccataaccctcacc
gccccctccggagcattaggcgcacgcctggccggcatcaacgcaggcggctcccattcc
gtgtccgtttccagcgacggacaggtatacgcgtggggcgacaacacgcacggccaaatc
ggcgacggcacccacaccggacgcaccctccccaccggcacagccgcacctgcagatgtg
ctcttcacccaggcgacggcaggcaggaaccacacggcagccctcgacaccaccggacga
atctggacctggggcgacaactcagaaggacagctcggacgcggaacggtcggcggagat
gattccacgcccggccttgccgccactggcgatacacgattcactcagatcaatgccggc
gacgaccacaccatcgccctggacacgaccgggcacgtctggacctggggcaacgacacc
tacggccagctcggacgcggagcggccggcagcgccacaggcacacccgcaatacgccca
atgcccgagggcacgccgcccgggctggtctacacccagatacaggccggtggcaatcac
tccctcgccatagccaacaacggcaccctgtatgcctggggcgacgacacctacggccag
ctgggagacaataagaccggcaccgccacggccacccccacccctgtacgcaccccgacc
ggtgcacccccaagcttcacctggttgtatctggccgcaggcaagaaccacacgcttgcc
atcgcaaccgacaccaccgccaacaccaccgccgtgtacgcattcggctccggccggcac
ggccaaatcggcaaataccctgcagaggccgacaaccccctgcctaccaagtccgatctg
cccaacggtgccactatcttgagagtctccgccgggggtcagacctcgcaggccatcatc
tccactggagctctctacacctggggaagcaatacgaacagccagatcggcgacggcacc
aataccgacaggaccgtgccagtcgccatcaccaccccgggtcgggcgaacttcacatgg
aagcgggccgccgtgggaatgagccacacccttggcatcgactcggcaggtaccctgcat
acctggggtgacaacacccacggccagctcggcgaaggaaccgacacgccccgatccaca
cccggaaagaccactttccccaccttgcaggtcacctcgaccgcattcggggctcgacct
ggcggaaaccccagcccacaaaccgacgattcctggcaggtcactgcaccagcgaggaag
caccggcccggtcgggtacccctgactatccgatggagtctgaacggcaaaccacaaccc
gacaccgacctggactacacctatgccccgagccggtacaccgtcacctacgacaccggc
ggagggacacccgtccctcccgatgccacagtggacgaggatgggatcacggcacggcct
gccaccgaccccacacgagcggaccatgtgttcgacggatggtttgacggagatacggct
tacgacttcacccagcccatcgaccgggacatgacccttaccgcccactggcaccagccc
ggccactggacgctgagtccggaccacggcattgactccggcggcgagaccgtcacccta
acccctcccgcaccaggcggcatgcgcctggcccaggtcagcgcaggaagtcgaaactca
ctgggcatcggctcagacggcaacgcctacgcctggggatccaacgatagtggtcagctc
ggcgacgggacccgcaccgaccggtccacccccgtaagagtcgccactccgaccggagca
ggcaacggattcacctggacccaggtccaggccggtgaatccatgggcatcggcctgggc
tctgatggcaacgcctacgcctggggatccaacaccaacggcctcggcgacggcaccagc
acctcctccgccctgcccgtccgagtcgccaccccaaccggaaccgcacccgaattccgg
tacacgcaggtcgcagtcggcggtcagcagctcatggcactcggctctgatggcaacgcc
tacgcctggggatccaacaccaacggcctcggcgacggcaccagcacctcctccgccctg
cccgtccgagtcgccaccccaaccggaaccgcacccgaattccggtacacccgcatcagc
gctggagacggattcgccctggcactcggtaatgacgggcaggtatacagttggggttcc
aactccaacggcaggctcggtcaaggcagcgcaatcagcggaaacggactattgcccggg
cctattgccacacccgtaggagccgacaaggcccccgtcttcacccagatcagcgcaggt
gcctatcatgccctggccttggacgaggacggacacgcctgggcctggggccgcaacaac
agcggacagaccacccctgccttgagcggagaccagaccgtacccgtccaggtaccgctc
ccccagggcgcacccgaagggttcgcctacacccagctggcggcagggggaagccacagc
ctggccatcggaaccaatcaggtggtctacggatggggcgacaacacccacggccagctc
gccgacgggcgcgcttcacagcaacccgcacaggccaagaaccctgatacccccaatcag
gcactcaccgcccgcgccatcagcgccgcaggtgaccacagcctggccatcggaaccagc
gggacggcctatggattcgggcagaacaccaaccaccagggtggcacaagagccggatcc
gccgacctcaccgaagcaacccccatcaccattccagccgacggagtacccacccgaatc
tccttcgacgggcaggacagcaccaacatccgtcaacaacccgacggcacctggcagatc
accacacctgcccatgaacccggatcgaccaccgcccgcatccagtggaccatcgccggg
tacccccaacccgacgacacctccaacacctacacctaccagcacactgccaggctccca
aacgcaggcggcatcggcatcgtcctcctgctggtcgtagggttgctgaccatggcggct
gccgcggcaaggcaacgacagttgaagaggccccgggagtag |