Bifidobacterium coryneforme: BCOR_0360
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Entry
BCOR_0360 CDS
T03236
Name
(GenBank) metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bcor
Bifidobacterium coryneforme
Pathway
bcor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCOR_0360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcor03019
]
BCOR_0360
Messenger RNA biogenesis [BR:
bcor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BCOR_0360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
AII74380
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Position
478919..480811
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AA seq
630 aa
AA seq
DB search
METQVRMARKTQEEKTTSKSRNRQSASKGRNRSAGAGKKGNGRSRGESRGRRNGSMQRGK
GTQVEQRLVAPPKYRKGSMRIVPLGGLGEIGRNMNVIEYNGHILLIDCGVLFPEEEQPGV
DLILPDFSYIKDKLDQIDALVLTHGHEDHIGGVPYLLKMRPDIPLIGSKLTLGFVDAKCE
EHHLKPTEVEVKGRDKLKVGPFNLEFVSVTHSIPDALAVSVRTPAGHIIDTGDMKIDPLP
LDHRLTDLREFGKLGESGVDLLMADSTNAEVPGYVKPEISISPALDKAFAEAQRKIVVAS
FSSHVHRVQQVVDTAHKYGRKVVFAGRSMVRNMSIASDLGYLHLPEDTVVDLKDAHDIPD
EKIVYMCTGSQGEPMAALGRIADGTHRDITINEFDTVILASSLIPGNEHGVYKVINKLVR
MGAKVVNRDNAAIHVSGHSDEGELLHFYNIVQPKCAMPIHGENRHLVANGLIAVKTGVDP
QNVVLAEDGDVVDLYHGKAAVVGSVPCGYVYVDGDSVGELTDEELEQRRILGTEGFVSAF
AVVDSETGKVVSGPKVYLNAVAEDESEFKAINAQVVDQLEDAMANGTTGTYQLQQLMRRT
LGGWISRKLHRRPMIVPVVADVATDVEKQD
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggaaacacaagtgagaatggctagaaaaacgcaagaagagaagacaacaagcaagagc
aggaacaggcaatccgcctccaagggccgcaaccggtccgcaggcgcaggcaagaagggg
aacggcaggtcgcgtggtgaatcccgcggtcgccgcaacggttccatgcagcgaggaaag
gggacccaggtagagcagcgtctggtggcgcctcccaagtaccgcaagggatccatgcgg
atcgttccactgggtggtctgggcgaaatcggccgcaacatgaatgtgatcgagtacaac
ggacacattctgctcattgactgcggtgtcctcttccccgaagaggagcagccgggtgtg
gacctgattctgcccgacttcagctatatcaaggacaagctggaccagatcgatgccctg
gttctgacccacgggcatgaagaccacatcggtggtgtgccctacctgctcaagatgcgt
ccggacatccctctgattggttccaagctgaccctgggcttcgttgacgccaagtgtgag
gagcaccacctcaagcccaccgaggtggaggtcaagggacgcgacaagctcaaagtcggc
cccttcaacctggagttcgtgtccgtgacccactccatccccgatgccctggccgtctcc
gtacggacccccgccggtcatatcatcgacaccggcgatatgaagatcgatccgctgccc
cttgaccaccgactgaccgatctgcgtgagttcggcaagctgggtgagtccggtgtggac
ctgctcatggcggactccaccaatgcggaggtgcctggatacgtcaagccggagatctcc
atctccccggccctcgacaaggcctttgccgaggctcagcgcaagatcgtcgtggcctcc
ttctccagccacgtgcaccgggtgcagcaggtggtggacaccgcccacaagtatggacgc
aaggtggtattcgccggacgctccatggtgcgtaacatgtcgatcgcttccgacctcgga
tacctccatctgcccgaggacacggtggtggacctcaaggatgcgcatgacatcccggac
gagaagatcgtttacatgtgcacgggttcccagggcgagcccatggcggccctgggccgt
atcgccgatgggacccaccgtgacatcaccatcaacgagttcgatacggtcatcctggcc
agctccctgattcccggcaacgagcacggggtctataaggtcatcaacaagctggtgcgt
atgggggccaaggtggtcaaccgcgacaatgcggccatccacgtttccggccactccgac
gagggcgagctcctgcacttctacaacatcgtgcagcccaagtgcgccatgcccatccac
ggtgagaaccgccacctggtggccaacggtctgattgccgtcaagaccggtgtggacccc
cagaacgtcgtcctggccgaggacggcgacgtggtcgacctctaccatggcaaggccgcc
gtagtcggatccgtgccctgcggatatgtctacgtggatggtgattccgtgggcgagctg
accgatgaggagctggagcagcgccgcatcctgggcaccgagggattcgtctcggccttc
gccgtggtcgacagcgagaccggcaaggtcgtttcgggccccaaggtctacctgaatgcg
gtcgccgaggacgagagcgagttcaaagccatcaacgcgcaggtggtcgaccagcttgag
gacgccatggccaatggcaccacgggcacctaccaactgcagcagctcatgcgtcgcacc
ctgggcgggtggatctccaggaagctgcatcgccggcccatgattgtcccggtcgtggcc
gacgtggccaccgatgtggagaagcaggactga
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